RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SNX2O60749 519 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 NDUFB8O95169 186 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 CD63P08962 238 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 CLTBP09497 229 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 MYF5P13349 255 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 RPS6KB1P23443 525 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 RGS2P41220 211 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 UBE4AQ14139 1066 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 MANEAQ5SRI9 462 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 ANO1Q5XXA6 986 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 RBM44Q6ZP01 1051 aaKnown RBP7.35□□□□□ -1.23
USP53-206ENST00000510737 GPR142Q7Z601 462 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 PNNQ9H307 717 aaKnown RBP7.35□□□□□ -1.23
USP53-206ENST00000510737 PCDHA12Q9UN75 941 aa7.35□□□□□ -1.23
USP53-206ENST00000510737 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
USP53-206ENST00000510737 TMEM272A0A1B0GTI8 110 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 C4orf47A7E2U8 309 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 DDX58O95786 925 aaKnown RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 ST6GAL1P15907 406 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 MAPK4P31152 587 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 CARSP49589 748 aaKnown RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 HMGCS2P54868 508 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 IFIT5Q13325 482 aaKnown RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 GAB1Q13480 694 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 GCKRQ14397 625 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 AASDHQ4L235 1098 aaPredicted RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 LCE1EQ5T753 118 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 CXorf57Q6NSI4 855 aaKnown RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 LDHAL6AQ6ZMR3 332 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 TBC1D22AQ8WUA7 517 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 LRTOMTQ8WZ04 291 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 PIGKQ92643 395 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 APIPQ96GX9 242 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 CINPQ9BW66 212 aaPredicted RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 SLC28A3Q9HAS3 691 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 MOV10Q9HCE1 1003 aaKnown RBP7.34□□□□□ -1.23
USP53-206ENST00000510737 MTCH2Q9Y6C9 303 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 ZFHX4Q86UP3 3567 aa7.34□□□□□ -1.23
USP53-206ENST00000510737 UTYO14607 1347 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 TRBV5-3A0A0A0MS03 114 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 DDTLA6NHG4 134 aaPredicted RBP7.33□□□□□ -1.24
USP53-206ENST00000510737 KBTBD13C9JR72 458 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 CTIFO43310 598 aaKnown RBP7.33□□□□□ -1.24
USP53-206ENST00000510737 WDR47O94967 919 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 PRTGQ2VWP7 1150 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 FSTL5Q8N475 847 aaPredicted RBP7.33□□□□□ -1.24
USP53-206ENST00000510737 FAM156AQ8NDB6 213 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 BCAS4Q8TDM0 211 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 ZNF479Q96JC4 524 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 MRPL44Q9H9J2 332 aaKnown RBP7.33□□□□□ -1.24
USP53-206ENST00000510737 C1orf112Q9NSG2 853 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 DCHS1Q96JQ0 3298 aa7.33□□□□□ -1.24
USP53-206ENST00000510737 hCG_2014768A0A024R1R8 64 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 ANKRD62A6NC57 917 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 F8W8V4 182 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 PRYO14603 147 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 SLC28A2O43868 658 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 ATG13O75143 517 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 MAP4K4O95819 1239 aaPredicted RBP7.32□□□□□ -1.24
USP53-206ENST00000510737 TIMP1P01033 207 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 CYBAP13498 195 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 HOXB2P14652 356 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 MYOGP15173 224 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 PBX1P40424 430 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 RHDQ02161 417 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 LMOD3Q0VAK6 560 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 NEXNQ0ZGT2 675 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 MTA1Q13330 715 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 ACOX1Q15067 660 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 RNF220Q5VTB9 566 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 RFX8Q6ZV50 586 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 P3H2Q8IVL5 708 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 SLC44A5Q8NCS7 719 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 MBD3L2Q8NHZ7 208 aaPredicted RBP7.32□□□□□ -1.24
USP53-206ENST00000510737 SUN3Q8TAQ9 357 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 FAM227BQ96M60 508 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 ZPBPQ9BS86 351 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 PUS3Q9BZE2 481 aaKnown RBP7.32□□□□□ -1.24
USP53-206ENST00000510737 ZNF287Q9HBT7 754 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 ABHD10Q9NUJ1 306 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 VPS4AQ9UN37 437 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 PCDHB2Q9Y5E7 798 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 HEMK1Q9Y5R4 338 aaPredicted RBP7.32□□□□□ -1.24
USP53-206ENST00000510737 RLFQ13129 1914 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 TRANK1O15050 2925 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 ZDBF2Q9HCK1 2354 aa7.32□□□□□ -1.24
USP53-206ENST00000510737 AK9Q5TCS8 1911 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 FOXN3O00409 490 aaPredicted RBP7.31□□□□□ -1.24
USP53-206ENST00000510737 PQBP1O60828 265 aaKnown RBP7.31□□□□□ -1.24
USP53-206ENST00000510737 CBFA2T3O75081 653 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 ENTPD3O75355 529 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
USP53-206ENST00000510737 MT-ND5P03915 603 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 HOXC6P09630 235 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 ANAPC15P60006 121 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 RAB30Q15771 203 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 PRAMEF19Q5SWL8 479 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 FAM102BQ5T8I3 360 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 NUGGCQ68CJ6 796 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms