RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 APOA5Q6Q788 366 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 CYP26C1Q6V0L0 522 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 MARK2Q7KZI7 788 aaKnown RBP2.3□□□□□ -2.04
XRCC4-204ENST00000509268 TBC1D1Q86TI0 1168 aaPredicted RBP2.3□□□□□ -2.04
XRCC4-204ENST00000509268 CNPY4Q8N129 248 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 SLC25A41Q8N5S1 370 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 KDM1BQ8NB78 822 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 GLMPQ8WWB7 406 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 LRTOMTQ8WZ04 291 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 OVCA2Q8WZ82 227 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 CD101Q93033 1021 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 ZNF414Q96IQ9 312 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 UBXN10Q96LJ8 280 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 SORBS1Q9BX66 1292 aaKnown RBP2.3□□□□□ -2.04
XRCC4-204ENST00000509268 STK31Q9BXU1 1019 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 BARHL1Q9BZE3 327 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 C22orf23Q9BZE7 217 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.3□□□□□ -2.04
XRCC4-204ENST00000509268 NUP62CLQ9H1M0 184 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 CERS4Q9HA82 394 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 ITM2CQ9NQX7 267 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 RASSF1Q9NS23 344 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 BLOC1S4Q9NUP1 217 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 TPCN1Q9ULQ1 816 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 CORO2BQ9UQ03 480 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 CRYL1Q9Y2S2 319 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 PCDHGB2Q9Y5G2 931 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 SLC4A4Q9Y6R1 1079 aa2.3□□□□□ -2.04
XRCC4-204ENST00000509268 RRN3P2A6NIE6 340 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 SAC3D1A6NKF1 404 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 RHPN2P1A8MT19 583 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 PRAC2D3DTV9 90 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 XPNPEP2O43895 674 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 TXNP10599 105 aaKnown RBP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 TSHRP16473 764 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 BTF3P20290 206 aaKnown RBP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 DGKAP23743 735 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 PDIA3P30101 505 aaKnown RBP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 SLC16A2P36021 539 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 CSRP3P50461 194 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 TERF1P54274 439 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 CACNB3P54284 484 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ZNF543Q08ER8 600 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 GALNT1Q10472 559 aaPredicted RBP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 G3BP1Q13283 466 aaKnown RBP eCLIP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 BFSP2Q13515 415 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 PMS2P11Q13670 270 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 BLMHQ13867 455 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ACCSLQ4AC99 568 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 FAM209BQ5JX69 171 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ARMC3Q5W041 872 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 RETSATQ6NUM9 610 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 KRT77Q7Z794 578 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ANKRD18AQ8IVF6 992 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 CACNA2D3Q8IZS8 1091 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 FAM185AQ8N0U4 392 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ANKRD44Q8N8A2 993 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 SPATA20Q8TB22 786 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 KAT2AQ92830 837 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 PHKBQ93100 1093 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 NMD3Q96D46 503 aaKnown RBP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 BICD1Q96G01 975 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 NT5C1BQ96P26 610 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ZNF347Q96SE7 839 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ABHD14AQ9BUJ0 271 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 POLDIP3Q9BY77 421 aaKnown RBP2.29□□□□□ -2.04
XRCC4-204ENST00000509268 LRRC27Q9C0I9 530 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 IL21RQ9HBE5 538 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 ATP6V0A4Q9HBG4 840 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 RIC8AQ9NPQ8 531 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 SMC4Q9NTJ3 1288 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 GRHPRQ9UBQ7 328 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 HPSEQ9Y251 543 aa2.29□□□□□ -2.04
XRCC4-204ENST00000509268 IGLV5-37A0A075B6J1 123 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 B9A039 149 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 EIF3FO00303 357 aaPredicted RBP2.28□□□□□ -2.04
XRCC4-204ENST00000509268 NEURL1O76050 574 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 SOX30O94993 753 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 AMBPP02760 352 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 CSTBP04080 98 aaKnown RBP2.28□□□□□ -2.04
XRCC4-204ENST00000509268 IFIT1P09914 478 aaKnown RBP2.28□□□□□ -2.04
XRCC4-204ENST00000509268 DHRS4L1P0CG22 281 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 VDRP11473 427 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 MYF5P13349 255 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 TGM2P21980 687 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 GNLYP22749 145 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 STT3AP46977 705 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 ICA1Q05084 483 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 PDE1CQ14123 709 aaPredicted RBP2.28□□□□□ -2.04
XRCC4-204ENST00000509268 POLD3Q15054 466 aaPredicted RBP2.28□□□□□ -2.04
XRCC4-204ENST00000509268 FAM90A2PQ658T7 463 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 HIBCHQ6NVY1 386 aaPredicted RBP2.28□□□□□ -2.04
XRCC4-204ENST00000509268 MAEAQ7L5Y9 396 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 TTC30BQ8N4P2 665 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 RNF152Q8N8N0 203 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 TMEM41AQ96HV5 264 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 GPR78Q96P69 363 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 TMEM120AQ9BXJ8 343 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 B3GNT4Q9C0J1 378 aa2.28□□□□□ -2.04
XRCC4-204ENST00000509268 BTBD1Q9H0C5 482 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms