RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RFC1P35251 1148 aaPredicted RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 HDAC4P56524 1084 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 GSCP56915 257 aaPredicted RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 NXPH1P58417 271 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 COL9A2Q14055 689 aaPredicted RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 SUZ12Q15022 739 aaKnown RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 STX1AQ16623 288 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 CLEC16AQ2KHT3 1053 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 C6orf118Q5T5N4 469 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 ACBD5Q5T8D3 534 aaPredicted RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 NAPEPLDQ6IQ20 393 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 C22orf39Q6P5X5 142 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 TRIM69Q86WT6 500 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 MARCH9Q86YJ5 346 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 CCDC185Q8N715 623 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 CDC6Q99741 560 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 TMEM51Q9NW97 253 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 PPARGC1AQ9UBK2 798 aaKnown RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 CA5BQ9Y2D0 317 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 WASF2Q9Y6W5 498 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 FASNP49327 2511 aaKnown RBP16.58■□□□□ 0.24
LMNA-222ENST00000508500 CELSR3Q9NYQ7 3312 aa16.58■□□□□ 0.24
LMNA-222ENST00000508500 APC2O95996 2303 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 C1QTNF3-AMACRE9PGA6 284 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 TLR4O00206 839 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 CBX4O00257 560 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 ATP1A3P13637 1013 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 ACVRL1P37023 503 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 GRK6P43250 576 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 PTPN9P43378 593 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 NRG1Q02297 640 aaPredicted RBP16.57■□□□□ 0.24
LMNA-222ENST00000508500 GNA12Q03113 381 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 UBXN1Q04323 297 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 BNIP3Q12983 259 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 TRIM72Q6ZMU5 477 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 DPY19L3Q6ZPD9 716 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 STRADAQ7RTN6 431 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 NLRP14Q86W24 1093 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 PHF13Q86YI8 300 aaPredicted RBP16.57■□□□□ 0.24
LMNA-222ENST00000508500 DRC7Q8IY82 874 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 TMIEQ8NEW7 156 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 NEK11Q8NG66 645 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 SAP25Q8TEE9 199 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 SPON2Q9BUD6 331 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 CAAP1Q9H8G2 361 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 OR12D3Q9UGF7 316 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 DAAM1Q9Y4D1 1078 aa16.57■□□□□ 0.24
LMNA-222ENST00000508500 IGSF10Q6WRI0 2623 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 GOLGA8CPA6NN73 597 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
LMNA-222ENST00000508500 DFNA5O60443 496 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 SDC4P31431 198 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 CLCN6P51797 869 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 ARSIQ5FYB1 569 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 WDR59Q6PJI9 974 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 ZNF783Q6ZMS7 281 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 MON1BQ7L1V2 547 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 TMPRSS7Q7RTY8 843 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 KANSL1Q7Z3B3 1105 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 PRPF39Q86UA1 669 aaKnown RBP16.56■□□□□ 0.24
LMNA-222ENST00000508500 MFSD2AQ8NA29 543 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 KLK6Q92876 244 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 OSBPL2Q9H1P3 480 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 ATP13A1Q9HD20 1204 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 ADAM22Q9P0K1 906 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 TPX2Q9ULW0 747 aaKnown RBP16.56■□□□□ 0.24
LMNA-222ENST00000508500 FCF1Q9Y324 198 aaKnown RBP16.56■□□□□ 0.24
LMNA-222ENST00000508500 GPSM3Q9Y4H4 160 aa16.56■□□□□ 0.24
LMNA-222ENST00000508500 TEX33O43247 280 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 TNFSF14O43557 240 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 RNGTTO60942 597 aaKnown RBP16.55■□□□□ 0.24
LMNA-222ENST00000508500 LEFTY1O75610 366 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 LRIG2O94898 1065 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 TPM2P07951 284 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 KRT3P12035 628 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 EPHA8P29322 1005 aaPredicted RBP16.55■□□□□ 0.24
LMNA-222ENST00000508500 SERPINH1P50454 418 aaKnown RBP16.55■□□□□ 0.24
LMNA-222ENST00000508500 GSE1Q14687 1217 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 AOPEPQ8N6M6 819 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 C3orf20Q8ND61 904 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 GRIN3AQ8TCU5 1115 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 FAM172AQ8WUF8 416 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 ARHGEF2Q92974 986 aaKnown RBP16.55■□□□□ 0.24
LMNA-222ENST00000508500 PCMTD1Q96MG8 357 aaPredicted RBP16.55■□□□□ 0.24
LMNA-222ENST00000508500 AGPAT1Q99943 283 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 SYT11Q9BT88 431 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 PREBQ9HCU5 417 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 GDF3Q9NR23 364 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 TMEM248Q9NWD8 314 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 IL36AQ9UHA7 158 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 DNAI1Q9UI46 699 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 LHX6Q9UPM6 363 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 ZFR2Q9UPR6 939 aaKnown RBP16.55■□□□□ 0.24
LMNA-222ENST00000508500 DMTF1Q9Y222 760 aa16.55■□□□□ 0.24
LMNA-222ENST00000508500 A0A1W2PQU0 124 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms