RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GRIP2Q9C0E4 1043 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 UPF3AQ9H1J1 476 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 FZD8Q9H461 694 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 DHX35Q9H5Z1 703 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLK4Q9HAZ1 481 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 NMRAL1Q9HBL8 299 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 LRRC4Q9HBW1 653 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 EML4Q9HC35 981 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PTPRHQ9HD43 1115 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TBC1D23Q9NUY8 699 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 OXSMQ9NWU1 459 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 GGA3Q9NZ52 723 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 LMCD1Q9NZU5 365 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM216Q9P0N5 145 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TJP2Q9UDY2 1190 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PGAP2Q9UHJ9 254 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNHIT2Q9UHR6 403 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TSPAN16Q9UKR8 245 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRHDEQ9UKU6 1024 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ADAMTS5Q9UNA0 930 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 AP4E1Q9UPM8 1137 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC8A2Q9UPR5 921 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 DERAQ9Y315 318 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 NR2E3Q9Y5X4 410 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 RPS6KL1Q9Y6S9 549 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSME4Q14997 1843 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A096LPK6 155 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 IGKV6-21A0A0C4DH24 114 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A0J9YVX5 310 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HEATR9A2RTY3 570 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDC14CA4D256 554 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TTC36A6NLP5 189 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 BBIP1A8MTZ0 92 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 LACTBL1A8MY62 500 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 G3V2L1 256 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNF103O00237 685 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 NOP56O00567 594 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CFLARO15519 480 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZSCAN9O15535 394 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZBTB14O43829 449 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HBP1O60381 514 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 NPHS1O60500 1241 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 LGR5O75473 907 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRPA1O75762 1119 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RAD17O75943 681 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 FARP2O94887 1054 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 OR6B1O95007 311 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ESRRBO95718 433 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 AP2A1O95782 977 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ITGB3P05106 788 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HNRNPCP07910 306 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 STAG3L1P0CL83 205 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HSPA1AP0DMV8 641 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HSPA1BP0DMV9 641 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CXCL8P10145 99 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDK4P11802 303 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ENO3P13929 434 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 IDO1P14902 403 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ATP6V1B1P15313 513 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 YBX3P16989 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF12P17014 697 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RHOQP17081 205 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDH2P19022 906 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TFEBP19484 476 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HMOX2P30519 316 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC7A1P30825 629 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RAP1GAPP47736 663 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ALDH3B2P48448 385 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ERFP50548 548 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 NDST1P52848 882 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 BCAT1P54687 386 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 NRLP54845 237 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 AIF1P55008 147 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDH8P55286 799 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SESN2P58004 480 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 IGBP1P78318 339 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYBPC1Q00872 1141 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 GBE1Q04446 702 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 BST2Q10589 180 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 MPP3Q13368 585 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC12A1Q13621 1099 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIM25Q14258 630 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SQLEQ14534 574 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSMD5Q16401 504 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC9B1Q4ZJI4 515 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SAMD4BQ5PRF9 694 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SYCP2LQ5T4T6 812 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ARHGAP17Q68EM7 881 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 NXNQ6DKJ4 435 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 JADE1Q6IE81 842 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRMT9Q6P2P2 845 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 IYDQ6PHW0 289 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 METTL7BQ6UX53 244 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 HACD2Q6Y1H2 254 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 LPCAT2Q7L5N7 544 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PIWIL4Q7Z3Z4 852 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 GPR141Q7Z602 305 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLEC14AQ86T13 490 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PATL1Q86TB9 770 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 LINC00523Q86TU6 105 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms