RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 JMJD6Q6NYC1 403 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF410Q86VK4 478 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ENAHQ8N8S7 591 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 GMCL1P1Q8NEA9 526 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 OR2W6PQ8NHA6 318 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 IRF7Q92985 503 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NTAN1Q96AB6 310 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RMDN1Q96DB5 314 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 IQCDQ96DY2 449 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZIM3Q96PE6 472 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 FIZ1Q96SL8 496 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 GAL3ST1Q99999 423 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HTATIP2Q9BUP3 242 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CINPQ9BW66 212 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MRPL1Q9BYD6 325 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 STK33Q9BYT3 514 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HIPK3Q9H422 1215 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NLRC4Q9NPP4 1024 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ABCF3Q9NUQ8 709 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 FAM105AQ9NUU6 356 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZNHIT6Q9NWK9 470 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RHBDL2Q9NX52 303 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PLXNA3P51805 1871 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1W2PQ27 194 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1W2PQ64 194 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1W2PQC6 194 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1W2PQD8 194 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A8MUI8 341 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF487B1APH4 448 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TGFBR3LH3BV60 316 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SNX3O60493 162 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RNASEH1O60930 286 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 DDNO94850 711 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ALOX5P09917 674 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 P4HA1P13674 534 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PDE6AP16499 860 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HTR1BP28222 390 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PRDX6P30041 224 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 OXTRP30559 389 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PTPN9P43378 593 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HADHBP55084 474 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RAP2BP61225 183 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CCNA1P78396 465 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 IGSF11Q5DX21 431 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 KANK2Q63ZY3 851 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ARHGAP36Q6ZRI8 547 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TRIM22Q8IYM9 498 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 AGBL3Q8NEM8 1001 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 COX4I2Q96KJ9 171 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MMS19Q96T76 1030 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 OLFM1Q99784 485 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SIKE1Q9BRV8 207 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HAUS8Q9BT25 410 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 KRT23Q9C075 422 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TFB2MQ9H5Q4 396 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 S100A14Q9HCY8 104 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 BLOC1S4Q9NUP1 217 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 AKAP7Q9P0M2 348 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 KCND3Q9UK17 655 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ATP8B3O60423 1300 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 IGKV6D-21A0A0A0MT36 114 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A0A1B0GTQ1 180 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TCRBV16S1A1N1A0A5B0 115 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PDHXO00330 501 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TRAF5O00463 557 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PIP5K1BO14986 540 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZBTB14O43829 449 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PRAMEF4O60810 478 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CALM1P0DP23 149 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CALM2P0DP24 149 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CALM3P0DP25 149 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 DLATP10515 647 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NME1P15531 152 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CD6P30203 668 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NTSR1P30989 418 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TRIM23P36406 574 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CEACAM6P40199 344 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RECQLP46063 649 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NPY2RP49146 381 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 EPHB1P54762 984 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PER3P56645 1201 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PSMC5P62195 406 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ECT2LQ008S8 904 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RPL6Q02878 288 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CREMQ03060 361 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF33BQ06732 778 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 DLG1Q12959 904 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RESTQ13127 1097 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 LAMC2Q13753 1193 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 R3HDM1Q15032 1099 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TBRG1Q3YBR2 411 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ZACNQ401N2 412 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PLEKHG4Q58EX7 1191 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CLVS2Q5SYC1 327 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RNF43Q68DV7 783 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 DENND5AQ6IQ26 1287 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TRIM72Q6ZMU5 477 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SH2D5Q6ZV89 423 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MAP4K3Q8IVH8 894 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RNF113BQ8IZP6 322 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms