RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 NUMBP49757 651 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 YBEYP58557 167 aaPredicted RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 IFI35P80217 286 aaPredicted RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 GNA12Q03113 381 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 ZNF33AQ06730 810 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 ZBTB17Q13105 803 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 CDH18Q13634 790 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 MORF4L2Q15014 288 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 ANO4Q32M45 955 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 MPPE1Q53F39 396 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 BEND6Q5SZJ8 279 aaPredicted RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 RNASEH2BQ5TBB1 312 aaKnown RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 IL31Q6EBC2 164 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 ITPRIPL1Q6GPH6 555 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 HIBCHQ6NVY1 386 aaPredicted RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 POTEHQ6S545 545 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 C4orf22Q6V702 233 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 TPGS1Q6ZTW0 290 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 MFN1Q8IWA4 741 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 CCDC117Q8IWD4 279 aaPredicted RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 PPIL6Q8IXY8 311 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 CELF5Q8N6W0 485 aaKnown RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 OR7D4Q8NG98 312 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 NSMCE1Q8WV22 266 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 CPT1BQ92523 772 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 PRCCQ92733 491 aaPredicted RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 FGF13Q92913 245 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 ARHGEF2Q92974 986 aaKnown RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 CAVIN3Q969G5 261 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 TMA16Q96EY4 203 aaKnown RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 AGAP3Q96P47 875 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 TSGA13Q96PP4 275 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 SPON2Q9BUD6 331 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 MUC3BQ9H195 1237 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 RSPH14Q9UHP6 348 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 IPO11Q9UI26 975 aaKnown RBP9.54□□□□□ -0.88
TPM3-218ENST00000505010 SHOC2Q9UQ13 582 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 TTLL3Q9Y4R7 772 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 WNT6Q9Y6F9 365 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 GPR179Q6PRD1 2367 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 COL4A3Q01955 1670 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 KIAA1549LQ6ZVL6 1849 aa9.54□□□□□ -0.88
TPM3-218ENST00000505010 MYLKQ15746 1914 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 A0A0D9SEW6 157 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 ILVBLA1L0T0 632 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 DCDC2BA2VCK2 349 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 GOLGA8MH3BSY2 632 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 J3KR12 359 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 GFRA2O00451 464 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SLC9A3R1O14745 358 aaPredicted RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 MATN3O15232 486 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 MAFKO60675 156 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 TMEM63AO94886 807 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 METTL18O95568 372 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 ADRB1P08588 477 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SRFP11831 508 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 CCNB1P14635 433 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 TCF3P15923 654 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 NFKB1P19838 968 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 PSMB4P28070 264 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 VIPR2P41587 438 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 IFNAR2P48551 515 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 OXCT1P55809 520 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SERINC3Q13530 473 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 KCNJ11Q14654 390 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 FAM78AQ5JUQ0 283 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SYCP2LQ5T4T6 812 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 ANKRD22Q5VYY1 191 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 RNF219Q5W0B1 726 aaPredicted RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 CXorf57Q6NSI4 855 aaKnown RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 RHBDF2Q6PJF5 856 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 LEKR1Q6ZMV7 388 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 PID1Q7Z2X4 250 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SETD3Q86TU7 594 aaPredicted RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 HOOK3Q86VS8 718 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SLC44A3Q8N4M1 653 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 ZCCHC9Q8N567 271 aaKnown RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 OR52K2Q8NGK3 314 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 SMARCD2Q92925 531 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 RSPRY1Q96DX4 576 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 VAT1Q99536 393 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 RTKNQ9BST9 563 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 MAGEH1Q9H213 219 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 GBA3Q9H227 469 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 ETNK1Q9HBU6 452 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 ATP13A1Q9HD20 1204 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 DNAJC17Q9NVM6 304 aaKnown RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 PLK2Q9NYY3 685 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 DLGAP2Q9P1A6 1054 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 TRHDEQ9UKU6 1024 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 TBC1D30Q9Y2I9 924 aa9.53□□□□□ -0.88
TPM3-218ENST00000505010 FARP1Q9Y4F1 1045 aaPredicted RBP9.53□□□□□ -0.88
TPM3-218ENST00000505010 ANKRD36A6QL64 1941 aa9.52□□□□□ -0.88
TPM3-218ENST00000505010 TCRBV7S3A2A0A539 114 aa9.52□□□□□ -0.89
TPM3-218ENST00000505010 CHADO15335 359 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms