RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SLC22A11Q9NSA0 550 aa3.48□□□□□ -1.85
RFC1-209ENST00000504974 GJD2Q9UKL4 321 aa3.48□□□□□ -1.85
RFC1-209ENST00000504974 TBX20Q9UMR3 447 aa3.48□□□□□ -1.85
RFC1-209ENST00000504974 LAMP3Q9UQV4 416 aa3.48□□□□□ -1.85
RFC1-209ENST00000504974 MYO5CQ9NQX4 1742 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 CASKIN1Q8WXD9 1431 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 CCDC196A0A1B0GTZ2 297 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 KCNJ18B7U540 433 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 PER2O15055 1255 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 GUCY1B2O75343 617 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 BCAR3O75815 825 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 CTSAP10619 480 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 KRT9P35527 623 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 PSMC2P35998 433 aaKnown RBP3.47□□□□□ -1.85
RFC1-209ENST00000504974 PAFAH1B1P43034 410 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 MMP13P45452 471 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 MTNR1AP48039 350 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 TMPRSS3P57727 454 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 VAMP2P63027 116 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 FBXO43Q4G163 708 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 MIDNQ504T8 468 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 UBAP2Q5T6F2 1119 aaKnown RBP3.47□□□□□ -1.85
RFC1-209ENST00000504974 SLC9C2Q5TAH2 1124 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 KIAA1614Q5VZ46 1190 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 TMEM268Q5VZI3 342 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 NAPEPLDQ6IQ20 393 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 LRRC8DQ7L1W4 858 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 IGFN1Q86VF2 1251 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 CMASQ8NFW8 434 aaPredicted RBP3.47□□□□□ -1.85
RFC1-209ENST00000504974 RFWD2Q8NHY2 731 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 ST8SIA4Q92187 359 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 EME1Q96AY2 570 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 ZBTB10Q96DT7 871 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 KIF1BPQ96EK5 621 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 RNF125Q96EQ8 232 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 APOPT1Q96IL0 206 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 MPHOSPH8Q99549 860 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 TUBB6Q9BUF5 446 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.47□□□□□ -1.85
RFC1-209ENST00000504974 FRMD8Q9BZ67 464 aaPredicted RBP3.47□□□□□ -1.85
RFC1-209ENST00000504974 LMAN2LQ9H0V9 348 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 HIPK3Q9H422 1215 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 EPHX3Q9H6B9 360 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 TRNAU1APQ9NX07 287 aaKnown RBP3.47□□□□□ -1.85
RFC1-209ENST00000504974 HDAC6Q9UBN7 1215 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 CD207Q9UJ71 328 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 CDH22Q9UJ99 828 aa3.47□□□□□ -1.85
RFC1-209ENST00000504974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.47□□□□□ -1.85
RFC1-209ENST00000504974 COL3A1P02461 1466 aaPredicted RBP3.47□□□□□ -1.85
RFC1-209ENST00000504974 FRMPD1Q5SYB0 1578 aa3.46□□□□□ -1.85
RFC1-209ENST00000504974 TROQ12816 1431 aaPredicted RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 NCOA1Q15788 1441 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 CEP162Q5TB80 1403 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 TRAPPC8Q9Y2L5 1435 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 ARHGEF40Q8TER5 1519 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 A0A1B0GVC2 190 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 A0A1W2PPC1 479 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 TARSL2A2RTX5 802 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 OR6C68A6NDL8 312 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 TMEM247A6NEH6 219 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 DNAJC9-AS1A6NH13 148 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FAM90A7PA6NKC0 464 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FAM90A22PA8MWA6 464 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FAM90A12PA8MX19 464 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FAM90A23PA8MXZ1 464 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FOXO6A8MYZ6 492 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 E5RJQ4 531 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 J3KRW8 73 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 TNPO2O14787 897 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 EPB41L2O43491 1005 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 CEP104O60308 925 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 NEURL1O76050 574 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 IL1AP01583 271 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 CD53P19397 219 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 GJC1P36383 396 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 TBX2Q13207 712 aaPredicted RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 ENTPD8Q5MY95 495 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FAM69AQ5T7M9 428 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 PAPD7Q5XG87 772 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 ISM2Q6H9L7 571 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 AADACL2Q6P093 401 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 SHC4Q6S5L8 630 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 MAATS1Q7Z4T9 603 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 SRRM1Q8IYB3 904 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 DPP10Q8N608 796 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 NANOGP1Q8N7R0 232 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 LRRC57Q8N9N7 239 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 TEX19Q8NA77 164 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 LSM14AQ8ND56 463 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 IL17REQ8NFR9 667 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 BCAS4Q8TDM0 211 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 FAR1Q8WVX9 515 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 HSPH1Q92598 858 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 ZUFSPQ96AP4 578 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 SH3KBP1Q96B97 665 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 ELP4Q96EB1 424 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 PPM1MQ96MI6 270 aa3.46□□□□□ -1.86
RFC1-209ENST00000504974 PHF7Q9BWX1 381 aaPredicted RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 PAIP1Q9H074 479 aaKnown RBP3.46□□□□□ -1.86
RFC1-209ENST00000504974 INTS2Q9H0H0 1204 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms