RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SH2D3CQ8N5H7 860 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ATP11CQ8NB49 1132 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 EXTL1Q92935 676 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PRR11Q96HE9 360 aaPredicted RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 CCDC114Q96M63 670 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 CCNL2Q96S94 520 aaPredicted RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PPP1R9BQ96SB3 815 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 IL12RB2Q99665 862 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 TSG101Q99816 390 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 FEM1AQ9BSK4 669 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 TRIM62Q9BVG3 475 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 TNKS2Q9H2K2 1166 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 USP29Q9HBJ7 922 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 EPB41L5Q9HCM4 733 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 DDIT4Q9NX09 232 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 COQ4Q9Y3A0 265 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PCDHGA8Q9Y5G5 932 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 NAV2Q8IVL1 2488 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 EME2A4GXA9 379 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 TRIM49BA6NDI0 452 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 CDRT15L2A8MXV6 281 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 RAD51BO15315 384 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 AQP9O43315 295 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SMAD6O43541 496 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 GJB6O95452 261 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ADCY5O95622 1261 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 PAK4O96013 591 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 MT-CO1P00395 513 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 CSF2P04141 144 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 PRNPP04156 253 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 RHOCP08134 193 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ITGA2BP08514 1039 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SRCP12931 536 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 KRT5P13647 590 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 HGFP14210 728 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 JUNDP17535 347 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ACADSBP45954 432 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 RECQLP46063 649 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 DNA2P51530 1060 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 NEK3P51956 506 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SKOR1P84550 965 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 CDK17Q00537 523 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 CCDC15Q0P6D6 951 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SPIDRQ14159 915 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 FGL2Q14314 439 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 STILQ15468 1287 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 TAF5Q15542 800 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 KIF26BQ2KJY2 2108 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 LINC00303Q3SY05 128 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 COLEC12Q5KU26 742 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 TPRG1LQ5T0D9 272 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 NEK5Q6P3R8 708 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 C22orf39Q6P5X5 142 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 KYAT3Q6YP21 454 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 KRBA2Q6ZNG9 492 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 CLEC14AQ86T13 490 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 VASH2Q86V25 355 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ARHGEF19Q8IW93 802 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC35F3Q8IY50 421 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 OR2A12Q8NGT7 310 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 WDR36Q8NI36 951 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC35C1Q96A29 364 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ALG14Q96F25 216 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 IFT43Q96FT9 208 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 PPP1R16AQ96I34 528 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 PPP1R13BQ96KQ4 1090 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 BMFQ96LC9 184 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 PRMT1Q99873 361 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 CCDC3Q9BQI4 270 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SIK2Q9H0K1 926 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 TCEAL2Q9H3H9 227 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 POPDC2Q9HBU9 364 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SIRPGQ9P1W8 387 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 APOBEC3BQ9UH17 382 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ARMCX3Q9UH62 379 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 KLF15Q9UIH9 416 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 RCOR1Q9UKL0 485 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 ATXN7L1Q9ULK2 861 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 HPSEQ9Y251 543 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 SNX10Q9Y5X0 201 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 MAST4O15021 2626 aa7.05□□□□□ -1.28
NPIPB3-203ENST00000504841 COL27A1Q8IZC6 1860 aaPredicted RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SPTY2D1-AS1A0A0U1RR47 76 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 NEMP1O14524 444 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 TERTO14746 1132 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 FPGTO14772 594 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PLD2O14939 933 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC16A3O15427 465 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 EFSO43281 561 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 LEFTY1O75610 366 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 TCEA3O75764 348 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 GRAP2O75791 330 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 LETM1O95202 739 aaPredicted RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 IGLV3-25P01717 112 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 ANXA6P08133 673 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC2A3P11169 496 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms