RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ATP13A1Q9HD20 1204 aa10.26□□□□□ -0.77
NUP54-203ENST00000504173 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
NUP54-203ENST00000504173 RBM12Q9NTZ6 932 aaKnown RBP10.26□□□□□ -0.77
NUP54-203ENST00000504173 ETNK2Q9NVF9 386 aa10.26□□□□□ -0.77
NUP54-203ENST00000504173 ELOVL2Q9NXB9 296 aa10.26□□□□□ -0.77
NUP54-203ENST00000504173 INTS6Q9UL03 887 aaKnown RBP10.26□□□□□ -0.77
NUP54-203ENST00000504173 ZKSCAN5Q9Y2L8 839 aa10.26□□□□□ -0.77
NUP54-203ENST00000504173 MFHAS1Q9Y4C4 1052 aa10.26□□□□□ -0.77
NUP54-203ENST00000504173 hCG_1818297A0A087WSY0 165 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 ARHGAP42A6NI28 874 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 RASA4BC9J798 803 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 DFFAO00273 331 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 RASA4O43374 803 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 MFSD11O43934 449 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 RNF40O75150 1001 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 PAPSS2O95340 614 aaPredicted RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 ASLP04424 464 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 PYGMP11217 842 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 KRT10P13645 584 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 CEACAM1P13688 526 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 ZFXP17010 805 aaPredicted RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 CSRP1P21291 193 aaKnown RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 TIE1P35590 1138 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 ACVRL1P37023 503 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 PLK1P53350 603 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 YBEYP58557 167 aaPredicted RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 GNG11P61952 73 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 DYNLT1P63172 113 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 SULT2A1Q06520 285 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 ZNF211Q13398 564 aaPredicted RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 TFDP2Q14188 446 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 E2F5Q15329 346 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 TAZQ16635 292 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 TFDP3Q5H9I0 405 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 SEL1L2Q5TEA6 688 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 NCBP2-AS2Q69YL0 99 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 LONP2Q86WA8 852 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 PQLC3Q8N755 202 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 NETO2Q8NC67 525 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 CYB5D2Q8WUJ1 264 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 SORCS1Q8WY21 1168 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 TTC17Q96AE7 1141 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 ALG14Q96F25 216 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 HMCESQ96FZ2 354 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 PSMB7Q99436 277 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 C2orf49Q9BVC5 232 aaPredicted RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 NOL6Q9H6R4 1146 aaKnown RBP10.25□□□□□ -0.77
NUP54-203ENST00000504173 LRRC19Q9H756 370 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 PRDM16Q9HAZ2 1276 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 HPCAL4Q9UM19 191 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 STARD13Q9Y3M8 1113 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 JRKLQ9Y4A0 524 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 OR51B4Q9Y5P0 310 aa10.25□□□□□ -0.77
NUP54-203ENST00000504173 FAM221BA6H8Z2 402 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ANTXRLA6NF34 631 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 CBX4O00257 560 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 KCNK3O14649 394 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ENC1O14682 589 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 SNAP91O60641 907 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 CST8O60676 142 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 EPN2O95208 641 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 DLDP09622 509 aaKnown RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 PLA2G2AP14555 144 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 GLDCP23378 1020 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 PTPN7P35236 360 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 CTSOP43234 321 aaPredicted RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 KIR2DL1P43626 348 aaPredicted RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 PAPOLAP51003 745 aaKnown RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 ST8SIA6P61647 398 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 MRPS21P82921 87 aaKnown RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 ECT2LQ008S8 904 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ZNF234Q14588 700 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 PAFAH1B3Q15102 231 aaKnown RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 FNDC3BQ53EP0 1204 aaKnown RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 C2orf27AQ580R0 203 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 CCDC181Q5TID7 509 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 EMC10Q5UCC4 262 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 DCAF12L1Q5VU92 463 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 AFMIDQ63HM1 303 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 EGFLAMQ63HQ2 1017 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 SLC9A4Q6AI14 798 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 RETSATQ6NUM9 610 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 Q6ZS52 159 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ARHGAP12Q8IWW6 846 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 CHPFQ8IZ52 775 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 SYNPOQ8N3V7 929 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ZNF513Q8N8E2 541 aaPredicted RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 RPLP0P6Q8NHW5 317 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ACDQ96AP0 544 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 HEMGNQ9BXL5 484 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 TLR10Q9BXR5 811 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ACE2Q9BYF1 805 aaPredicted RBP10.24□□□□□ -0.77
NUP54-203ENST00000504173 OSBPL8Q9BZF1 889 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 SLC39A8Q9C0K1 460 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 KLC2Q9H0B6 622 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 ARRDC1-AS1Q9H2J1 176 aa10.24□□□□□ -0.77
NUP54-203ENST00000504173 SP110Q9HB58 689 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms