RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SLC12A4Q9UP95 1085 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 CENPFP49454 3210 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 MYO16Q9Y6X6 1858 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 ARHGAP42A6NI28 874 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 OR6C75A6NL08 312 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 DFFAO00273 331 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 TSPAN6O43657 245 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 USP12O75317 370 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
USP46-204ENST00000503060 POLBP06746 335 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 RAC2P15153 192 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 CNTFP26441 200 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 NAB1Q13506 487 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 GALNTL6Q49A17 601 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 MROH9Q5TGP6 573 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 MSANTD2Q6P1R3 559 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 TIFABQ6ZNK6 161 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 CDHR3Q6ZTQ4 885 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 RTL10Q7L3V2 364 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 CEP57Q86XR8 500 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 LZTR1Q8N653 840 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP46-204ENST00000503060 CATSPERBQ9H7T0 1116 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 MANSC1Q9H8J5 431 aa11.79□□□□□ -0.52
USP46-204ENST00000503060 ALG13Q9NP73 1137 aaKnown RBP11.79□□□□□ -0.52
USP46-204ENST00000503060 FKTNO75072 461 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 MOCS2O96007 188 aaPredicted RBP11.78□□□□□ -0.52
USP46-204ENST00000503060 SERPINB4P48594 390 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 PRMT2P55345 433 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 USP46P62068 366 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 ARHGAP36Q6ZRI8 547 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 MILR1Q7Z6M3 343 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 ARHGAP18Q8N392 663 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 ATPAF2Q8N5M1 289 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 GBP7Q8N8V2 638 aaPredicted RBP11.78□□□□□ -0.52
USP46-204ENST00000503060 ATAD1Q8NBU5 361 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 SEPT8Q92599 483 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 GPR62Q9BZJ7 368 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 LRRC40Q9H9A6 602 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 RXFP1Q9HBX9 757 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 FANCFQ9NPI8 374 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 IL37Q9NZH6 218 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 BFARQ9NZS9 450 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 SLC17A6Q9P2U8 582 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 VANGL2Q9ULK5 521 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 PLLPQ9Y342 182 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 MAGED1Q9Y5V3 778 aaPredicted RBP11.78□□□□□ -0.52
USP46-204ENST00000503060 HS3ST4Q9Y661 456 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 VWA8A3KMH1 1905 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 PLXNA3P51805 1871 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 NUP205Q92621 2012 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 ALDH2P05091 517 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 FGFR3P22607 806 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 SLC11A1P49279 550 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 TUBP50607 506 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 NRG1Q02297 640 aaPredicted RBP11.78□□□□□ -0.52
USP46-204ENST00000503060 PRPSAP1Q14558 356 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 TTC31Q49AM3 519 aaPredicted RBP11.78□□□□□ -0.52
USP46-204ENST00000503060 CES3Q6UWW8 571 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 C14orf80Q86SX3 495 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 FITM2Q8N6M3 262 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 TTC9BQ8N6N2 239 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 B3GALT6Q96L58 329 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 FCRL3Q96P31 734 aaPredicted RBP11.78□□□□□ -0.52
USP46-204ENST00000503060 SLC39A8Q9C0K1 460 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 GMIPQ9P107 970 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 USH1CQ9Y6N9 552 aa11.78□□□□□ -0.52
USP46-204ENST00000503060 E9PAM4 449 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.52
USP46-204ENST00000503060 CLPPQ16740 277 aaPredicted RBP11.77□□□□□ -0.52
USP46-204ENST00000503060 TCTN1Q2MV58 587 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 FBXW10Q5XX13 1052 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 PACS2Q86VP3 889 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 KLHDC8BQ8IXV7 354 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.52
USP46-204ENST00000503060 CERS2Q96G23 380 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 SLC13A1Q9BZW2 595 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 PCMTD2Q9NV79 361 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 HCSTQ9UBK5 93 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 TLR6Q9Y2C9 796 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 TTC3P53804 2025 aa11.77□□□□□ -0.52
USP46-204ENST00000503060 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 PSMD3O43242 534 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 CACNG3O60359 315 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 FOXD2O60548 495 aaPredicted RBP11.77□□□□□ -0.53
USP46-204ENST00000503060 BGNP21810 368 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 CRHR1P34998 444 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 NPY2RP49146 381 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
USP46-204ENST00000503060 ARPP19P56211 112 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 FYB2Q5VWT5 728 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 FUT10Q6P4F1 479 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 OTOP3Q7RTS5 596 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 NKAIN3Q8N8D7 197 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms