RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CLEC14AQ86T13 490 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 PTRH1Q86Y79 214 aaKnown RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 PPM1KQ8N3J5 372 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 GUF1Q8N442 669 aaKnown RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 FBXO39Q8N4B4 442 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SGF29Q96ES7 293 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ALG14Q96F25 216 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 INTS4Q96HW7 963 aaKnown RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 CCDC3Q9BQI4 270 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SLC17A9Q9BYT1 436 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 FOXP3Q9BZS1 431 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SIK2Q9H0K1 926 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 TCEAL2Q9H3H9 227 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SIRPGQ9P1W8 387 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 GULP1Q9UBP9 304 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SLC12A6Q9UHW9 1150 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ATXN7L1Q9ULK2 861 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 UBR5O95071 2799 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SPTY2D1-AS1A0A0U1RR47 76 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 SUV39H1O43463 412 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 SMAD6O43541 496 aaKnown RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 F13A1P00488 732 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 CSF2P04141 144 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ITGA2BP08514 1039 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PAEPP09466 180 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ZSCAN22P10073 491 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 NME1P15531 152 aaKnown RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 TBXAS1P24557 533 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 UGT1A5P35504 534 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 DNA2P51530 1060 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PDX1P52945 283 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PLK1P53350 603 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 TLE1Q04724 770 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ENPEPQ07075 957 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 CCDC15Q0P6D6 951 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 NNTQ13423 1086 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 FGL2Q14314 439 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 TAF5Q15542 800 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ZCWPW2Q504Y3 356 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PRRT3Q5FWE3 981 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 NEK5Q6P3R8 708 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 DENND1BQ6P3S1 775 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ERN2Q76MJ5 926 aaKnown RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 RRAGAQ7L523 313 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 B3GNT8Q7Z7M8 397 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 C14orf80Q86SX3 495 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PARGQ86W56 976 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 DCP2Q8IU60 420 aaKnown RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 SLC35F3Q8IY50 421 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 OR2A12Q8NGT7 310 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 TPCN2Q8NHX9 752 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 GLMNQ92990 594 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 IFT43Q96FT9 208 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 HSFY1Q96LI6 401 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 CCDC114Q96M63 670 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 NT5C1BQ96P26 610 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PRMT1Q99873 361 aaKnown RBP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 STARD5Q9NSY2 213 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC171-209ENST00000498725 DDIT4Q9NX09 232 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ANKMY1Q9P2S6 941 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 PISDQ9UG56 409 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 IL36AQ9UHA7 158 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 HS3ST3A1Q9Y663 406 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 ANKRD36A6QL64 1941 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 BOD1L1Q8NFC6 3051 aa9.33□□□□□ -0.92
CCDC171-209ENST00000498725 DOPEY2Q9Y3R5 2298 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 E5RJQ4 531 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 FPGTO14772 594 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 PLD2O14939 933 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 SPINT1O43278 529 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 NOBOXO60393 691 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 GCATO75600 419 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 LEFTY1O75610 366 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 TCEA3O75764 348 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 GRAP2O75791 330 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 CNTN5O94779 1100 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 ADCY5O95622 1261 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 PRNPP04156 253 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 ANXA6P08133 673 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 RHOCP08134 193 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 KRT5P13647 590 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 ITGB6P18564 788 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 SYKP43405 635 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 RECQLP46063 649 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 RPIAP49247 311 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 OXCT1P55809 520 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 KRT83P78385 493 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 DPYDQ12882 1025 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 EIF2B5Q13144 721 aaKnown RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 NME3Q13232 169 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 SGCGQ13326 291 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 AUHQ13825 339 aaKnown RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 STILQ15468 1287 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms