RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 COL27A1Q8IZC6 1860 aaPredicted RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 CLGNO14967 610 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 STX6O43752 255 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 DFNA5O60443 496 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 TSPAN3O60637 253 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 CUTAO60888 179 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 PPFIA2O75334 1257 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 CSO75390 466 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 IGLV3-19P01714 112 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 C4BPAP04003 597 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 ZDHHC11BP0C7U3 371 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 SFTPCP11686 197 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 CD58P19256 250 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 ACP1P24666 158 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 ATP5C1P36542 298 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 DCTP40126 519 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 NASPP49321 788 aaPredicted RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 COPAP53621 1224 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 CYP4F2P78329 520 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 EFEMP1Q12805 493 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 ZNF394Q53GI3 561 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 C10orf120Q5SQS8 335 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 USP53Q70EK8 1073 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 UNC13DQ70J99 1090 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 HTR3DQ70Z44 454 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 ADAT2Q7Z6V5 191 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 SHISA5Q8N114 240 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 IQUBQ8NA54 791 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 PARD3BQ8TEW8 1205 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 ANP32BQ92688 251 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 OTUB2Q96DC9 234 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 SIPA1Q96FS4 1042 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 P2RY11Q96G91 374 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 PRR11Q96HE9 360 aaPredicted RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 SLC6A18Q96N87 628 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 SLC46A1Q96NT5 459 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 TWNKQ96RR1 684 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 C7orf25Q9BPX7 421 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 TRIM56Q9BRZ2 755 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 GSX1Q9H4S2 264 aaPredicted RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 TLR8Q9NR97 1041 aaKnown RBP5.77□□□□□ -1.49
SPTA1-209ENST00000498708 SATB2Q9UPW6 733 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 STON1Q9Y6Q2 735 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 MTORP42345 2549 aa5.77□□□□□ -1.49
SPTA1-209ENST00000498708 MED13LQ71F56 2210 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 GFRA2O00451 464 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 TRIM38O00635 465 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 WNT9AO14904 365 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 VILLO15195 856 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 OPA1O60313 960 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CACNG3O60359 315 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 GREM1O60565 184 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 PPP6R2O75170 966 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 FSBPO95073 299 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 HLA-DRAP01903 254 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 FAM163BP0C2L3 166 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CISD3P0C7P0 127 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 FAM200BP0CF97 657 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 TRIM49P0CI25 452 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 TRIM49CP0CI26 452 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 JUNBP17275 347 aaPredicted RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CD27P26842 260 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 EPHA8P29322 1005 aaPredicted RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 RBMS1P29558 406 aaKnown RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CASRP41180 1078 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 PIK3CAP42336 1068 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 INHBCP55103 352 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 C21orf59P57076 290 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 E2F1Q01094 437 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 GOLGA8FQ08AF8 430 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 GOLGA8DPQ0D2H9 430 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 STK4Q13043 487 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 STARD3Q14849 445 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 TGIF1Q15583 401 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 GEN1Q17RS7 908 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 KNOP1Q1ED39 458 aaKnown RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 SGSM1Q2NKQ1 1148 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 C3orf38Q5JPI3 329 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 SFMBT2Q5VUG0 894 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 SNX30Q5VWJ9 437 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CLEC20AQ6ZU45 233 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CBLL1Q75N03 491 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 ZNF765Q7L2R6 523 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 KANSL1Q7Z3B3 1105 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 ZNF366Q8N895 744 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 ZNF564Q8TBZ8 553 aaPredicted RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 SORCS1Q8WY21 1168 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 NDRG1Q92597 394 aaKnown RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 PRCCQ92733 491 aaPredicted RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 SGF29Q96ES7 293 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CYFIP2Q96F07 1278 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 ZNF396Q96N95 335 aaPredicted RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 DEPDC7Q96QD5 511 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CIPCQ9C0C6 399 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 OSBPL2Q9H1P3 480 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 CUEDC2Q9H467 287 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 FBXO44Q9H4M3 255 aa5.76□□□□□ -1.49
SPTA1-209ENST00000498708 ZSCAN16Q9H4T2 348 aaPredicted RBP5.76□□□□□ -1.49
SPTA1-209ENST00000498708 EBF2Q9HAK2 575 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms