RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 CALN1Q9BXU9 219 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 HDAC8Q9BY41 377 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 EVA1BQ9NVM1 165 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 ARHGEF38Q9NXL2 777 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 IL36AQ9UHA7 158 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 VPS51Q9UID3 782 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 CA5BQ9Y2D0 317 aa12.31□□□□□ -0.44
CNOT4-211ENST00000498534 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
CNOT4-211ENST00000498534 NYNRINQ9P2P1 1898 aaKnown RBP12.3□□□□□ -0.44
CNOT4-211ENST00000498534 K7ERQ8 282 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 SMAD6O43541 496 aaKnown RBP12.3□□□□□ -0.44
CNOT4-211ENST00000498534 SRGAP2O75044 1071 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 MT-CO3P00414 261 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 CTSLP07711 333 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 RRM1P23921 792 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 INSM1Q01101 510 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-211ENST00000498534 CAMK4Q16566 473 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 ZNF284Q2VY69 593 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 SLC25A52Q3SY17 297 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 ALFQ53S48 1182 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 ZNF783Q6ZMS7 281 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 ERN2Q76MJ5 926 aaKnown RBP12.3□□□□□ -0.44
CNOT4-211ENST00000498534 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 FAM71AQ8IYT1 594 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 DCBLD1Q8N8Z6 715 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 DCAF4L2Q8NA75 395 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 OR4C6Q8NH72 309 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 NT5C3BQ969T7 300 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-211ENST00000498534 IFT43Q96FT9 208 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 CRELD1Q96HD1 420 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 FEM1CQ96JP0 617 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 PSMB7Q99436 277 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 ABCG4Q9H172 646 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 PLCB1Q9NQ66 1216 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 MPP6Q9NZW5 540 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 HS3ST3A1Q9Y663 406 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 MYLKQ15746 1914 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
CNOT4-211ENST00000498534 SHROOM3Q8TF72 1996 aa12.3□□□□□ -0.44
CNOT4-211ENST00000498534 A0A0D9SEW6 157 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 ILVBLA1L0T0 632 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TK2O00142 265 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 FFAR2O15552 330 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TLX3O43711 291 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 BRINP1O60477 761 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 ENDOD1O94919 500 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 PRKCSHP14314 528 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 SCNN1AP37088 669 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 DUSP3P51452 185 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 DNA2P51530 1060 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 RPS21P63220 83 aaKnown RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 C19orf57Q0VDD7 668 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 MAN2A1Q16706 1144 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 FAM102AQ5T9C2 384 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 LINGO4Q6UY18 593 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 Q6ZSR6 202 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TMC6Q7Z403 805 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 CHST14Q8NCH0 376 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 MSANTD4Q8NCY6 345 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 OR13H1Q8NG92 308 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 SNIP1Q8TAD8 396 aaKnown RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 ARRDC3Q96B67 414 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 HAPLN3Q96S86 360 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TBCBQ99426 244 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 SLC17A9Q9BYT1 436 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TNKS2Q9H2K2 1166 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 PRORYQ9H606 182 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 IPO11Q9UI26 975 aaKnown RBP12.29□□□□□ -0.44
CNOT4-211ENST00000498534 SNX10Q9Y5X0 201 aa12.29□□□□□ -0.44
CNOT4-211ENST00000498534 TDRD6O60522 2096 aaKnown RBP12.28□□□□□ -0.44
CNOT4-211ENST00000498534 BPTFQ12830 3046 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 IGLV3-10A0A075B6K4 115 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 A6NNZ2 444 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 LEFTY1O75610 366 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 PIAS2O75928 621 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-211ENST00000498534 CKMT1AP12532 417 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 TFE3P19532 575 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-211ENST00000498534 GABRB2P47870 512 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 NEK3P51956 506 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 CLDN2P57739 230 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 HNRNPKP61978 463 aaKnown RBP eCLIP12.28□□□□□ -0.445e-7■□□□□ 10.3
CNOT4-211ENST00000498534 SGCGQ13326 291 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 RAPGEF1Q13905 1077 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 DRAP1Q14919 205 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-211ENST00000498534 VWA3BQ502W6 1294 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 CARD16Q5EG05 197 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 KIAA1161Q6NSJ0 714 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 C22orf39Q6P5X5 142 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 DPY19L3Q6ZPD9 716 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 ZNF683Q8IZ20 524 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 LSMEM2Q8N112 164 aa12.28□□□□□ -0.44
CNOT4-211ENST00000498534 LSM14AQ8ND56 463 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms