RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 F13A1P00488 732 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 SRCP12931 536 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 KRT10P13645 584 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 PFKFB1P16118 471 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 RPIAP49247 311 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 PDX1P52945 283 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 YWHAZP63104 245 aaKnown RBP13.76□□□□□ -0.21
COL1A1-209ENST00000495677 RPS21P63220 83 aaKnown RBP13.76□□□□□ -0.21
COL1A1-209ENST00000495677 NR0B2Q15466 257 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 KIAA1161Q6NSJ0 714 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 USP53Q70EK8 1073 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 TMEM110Q86TL2 294 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 ASB12Q8WXK4 309 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 FEM1CQ96JP0 617 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 MED15Q96RN5 788 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 IL12RB2Q99665 862 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 THAP9Q9H5L6 903 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 DYRK4Q9NR20 520 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 PCDHB4Q9Y5E5 795 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 LRP4O75096 1905 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 ARHGEF17Q96PE2 2063 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 TMX2-CTNND1H3BSU7 103 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 K7ELQ4 463 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 KPNA3O00505 521 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 AP1G1O43747 822 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 CLDN11O75508 207 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 PAK4O96013 591 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 ZSCAN22P10073 491 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 BRD2P25440 801 aaKnown RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 CCR1P32246 355 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 CLCN6P51797 869 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 KRT83P78385 493 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 FKBP3Q00688 224 aaKnown RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 FGL2Q14314 439 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 SEL1L3Q68CR1 1132 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 OR6B2Q6IFH4 312 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 CIR1Q86X95 450 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 SLC35C1Q96A29 364 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 PPP1R16AQ96I34 528 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-209ENST00000495677 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 TRIM4Q9C037 500 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 VPS28Q9UK41 221 aa13.75□□□□□ -0.21
COL1A1-209ENST00000495677 FLNCQ14315 2725 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 PLD2O14939 933 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 NVLO15381 856 aaKnown RBP13.74□□□□□ -0.21
COL1A1-209ENST00000495677 MT-CO1P00395 513 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 GLI1P08151 1106 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 JUNDP17535 347 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 SLC5A2P31639 672 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 SYKP43405 635 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 NUMBP49757 651 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 CDH4P55283 916 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 PFN3P60673 137 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 AUHQ13825 339 aaKnown RBP13.74□□□□□ -0.21
COL1A1-209ENST00000495677 SPIDRQ14159 915 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 DEFB133Q30KQ1 61 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 COBLL1Q53SF7 1204 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 DCAF17Q5H9S7 520 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-209ENST00000495677 C6orf132Q5T0Z8 1188 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 C14orf80Q86SX3 495 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 RPRD1AQ96P16 312 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-209ENST00000495677 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 ANKMY1Q9P2S6 941 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 SPASTQ9UBP0 616 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 CNTN6Q9UQ52 1028 aa13.74□□□□□ -0.21
COL1A1-209ENST00000495677 LMO7DNF2Z398 122 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 RNF103O00237 685 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 SPINT1O43278 529 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 BNIP3LO60238 219 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 LIPCP11150 499 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 FMO5P49326 533 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 NEK3P51956 506 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 PITX1P78337 314 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-209ENST00000495677 LRMPQ12912 555 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 EIF2B5Q13144 721 aaKnown RBP13.73□□□□□ -0.21
COL1A1-209ENST00000495677 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 SLC35F3Q8IY50 421 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 FBXO39Q8N4B4 442 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 ATP11CQ8NB49 1132 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 DENND6BQ8NEG7 585 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 LMO3Q8TAP4 145 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 LMX1AQ8TE12 382 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 EXTL1Q92935 676 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 PSMB7Q99436 277 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 CCDC3Q9BQI4 270 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-209ENST00000495677 C1QTNF2Q9BXJ5 285 aa13.73□□□□□ -0.21
COL1A1-209ENST00000495677 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms