RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 PSMB7Q99436 277 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 FZD3Q9NPG1 666 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 DNAJC28Q9NX36 388 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.47
TMEM53-209ENST00000495630 CSNK1G3Q9Y6M4 447 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 BICDL2A1A5D9 508 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 K7ERQ8 282 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 CSF2P04141 144 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 MYF5P13349 255 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 NOS2P35228 1153 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 SNX16P57768 344 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 RPS21P63220 83 aaKnown RBP17.95■□□□□ 0.46
TMEM53-209ENST00000495630 ZNF542PQ5EBM4 170 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 ARSIQ5FYB1 569 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 ISM2Q6H9L7 571 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 SETD3Q86TU7 594 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-209ENST00000495630 ELOA2Q8IYF1 753 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-209ENST00000495630 TPCN2Q8NHX9 752 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 IFI44Q8TCB0 444 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 CCDC97Q96F63 343 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-209ENST00000495630 PPP1R16AQ96I34 528 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 VCPIP1Q96JH7 1222 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 SLC46A1Q96NT5 459 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 SLC17A9Q9BYT1 436 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 SIK2Q9H0K1 926 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 ACP6Q9NPH0 428 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 GPR27Q9NS67 375 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 IL36AQ9UHA7 158 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 VPS51Q9UID3 782 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 ATMQ13315 3056 aa17.95■□□□□ 0.46
TMEM53-209ENST00000495630 SPTY2D1-AS1A0A0U1RR47 76 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 PPP1R3GB7ZBB8 358 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 B8ZZF3 427 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 SMAD6O43541 496 aaKnown RBP17.94■□□□□ 0.46
TMEM53-209ENST00000495630 SNAP91O60641 907 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 GRAP2O75791 330 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 CNTN5O94779 1100 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 PAK4O96013 591 aaPredicted RBP17.94■□□□□ 0.46
TMEM53-209ENST00000495630 RHOCP08134 193 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 RBMS1P29558 406 aaKnown RBP17.94■□□□□ 0.46
TMEM53-209ENST00000495630 RECQLP46063 649 aaPredicted RBP17.94■□□□□ 0.46
TMEM53-209ENST00000495630 FZD2Q14332 565 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 ACBD5Q5T8D3 534 aaPredicted RBP17.94■□□□□ 0.46
TMEM53-209ENST00000495630 SEL1L3Q68CR1 1132 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 SMYD5Q6GMV2 418 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 KLHL10Q6JEL2 608 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 ZCCHC8Q6NZY4 707 aaKnown RBP17.94■□□□□ 0.46
TMEM53-209ENST00000495630 ZSCAN30Q86W11 494 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 DCAF4L2Q8NA75 395 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 CHST14Q8NCH0 376 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 NELFBQ8WX92 580 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 TTC9Q92623 222 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 WDCPQ9H6R7 721 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 TMEM51Q9NW97 253 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 RRN3Q9NYV6 651 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 SALL4Q9UJQ4 1053 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
TMEM53-209ENST00000495630 POM121BA6NF01 834 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 DRGXA6NNA5 263 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 H3BM21 787 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 M0QYT0 321 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 RNF103O00237 685 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 NEBLO76041 1014 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 C6P13671 934 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 NME1P15531 152 aaKnown RBP17.93■□□□□ 0.46
TMEM53-209ENST00000495630 RRM1P23921 792 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 SKOR1P84550 965 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 SLC20A2Q08357 652 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 ALFQ53S48 1182 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 BRMS1LQ5PSV4 323 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 OR6B2Q6IFH4 312 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 KIAA1161Q6NSJ0 714 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 KYAT3Q6YP21 454 aaKnown RBP17.93■□□□□ 0.46
TMEM53-209ENST00000495630 DPY19L3Q6ZPD9 716 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 SLC26A9Q7LBE3 791 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 PTAR1Q7Z6K3 402 aaPredicted RBP17.93■□□□□ 0.46
TMEM53-209ENST00000495630 ZNF397Q8NF99 534 aaPredicted RBP17.93■□□□□ 0.46
TMEM53-209ENST00000495630 C1orf74Q96LT6 269 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 SRRTQ9BXP5 876 aaKnown RBP17.93■□□□□ 0.46
TMEM53-209ENST00000495630 CAAP1Q9H8G2 361 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 ARHGEF38Q9NXL2 777 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 IPO11Q9UI26 975 aaKnown RBP17.93■□□□□ 0.46
TMEM53-209ENST00000495630 PCDHGC3Q9UN70 934 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 SATB2Q9UPW6 733 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 PCDHGA8Q9Y5G5 932 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 COL6A6A6NMZ7 2263 aa17.93■□□□□ 0.46
TMEM53-209ENST00000495630 CPED1A4D0V7 1026 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 EME2A4GXA9 379 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-209ENST00000495630 BECN2A8MW95 431 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 TPP1O14773 563 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 LEFTY1O75610 366 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 TGM2P21980 687 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 GGCXP38435 758 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 RABIFP47224 123 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 CXCR3P49682 368 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 NEK3P51956 506 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 SLC6A3Q01959 620 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-209ENST00000495630 FGL2Q14314 439 aa17.92■□□□□ 0.46
TMEM53-209ENST00000495630 OLFML1Q6UWY5 402 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms