RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 KCNU1A8MYU2 1149 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 NR5A2O00482 541 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 GJB3O75712 270 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 TM7SF2O76062 418 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 SETSIPP0DME0 302 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 FGF3P11487 239 aaPredicted RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 CDC16Q13042 620 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 GALNT3Q14435 633 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 DPYSL2Q16555 572 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 LSM12Q3MHD2 195 aaKnown RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 C10orf120Q5SQS8 335 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 SPOUT1Q5T280 376 aaKnown RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 CNSTQ6PJW8 725 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 ZNF534Q76KX8 674 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 FSTL5Q8N475 847 aaPredicted RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 ADAM2Q99965 735 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 FBRSL1Q9HCM7 1045 aaKnown RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 CRTAC1Q9NQ79 661 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 CDH22Q9UJ99 828 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 EFR3BQ9Y2G0 817 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 ACTL7AQ9Y615 435 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 KIF3CO14782 793 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 GIPC1O14908 333 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 SH3BGRLO75368 114 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 SERPINA6P08185 405 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 PSMC3P17980 439 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 GABRB2P47870 512 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 KLF10Q13118 480 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 SFT2D3Q587I9 215 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 MARCH8Q5T0T0 291 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 RBM20Q5T481 1227 aaKnown RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 PIM3Q86V86 326 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 MZB1Q8WU39 189 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 ECSITQ9BQ95 431 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 FAM96AQ9H5X1 160 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 AGRPO00253 132 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 TFEBP19484 476 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 ARRB2P32121 409 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 TSPY1Q01534 308 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 PPP1R3AQ16821 1122 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 DUSP28Q4G0W2 176 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 TIGD5Q53EQ6 642 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 SLC9A4Q6AI14 798 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 ABI1Q8IZP0 508 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 PPHLN1Q8NEY8 458 aaKnown RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 SMIM14Q96QK8 99 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 GMPR2Q9P2T1 348 aaKnown RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 ZDHHC2Q9UIJ5 367 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 POMPQ9Y244 141 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 ITGB1P05556 798 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 EEF1B2P24534 225 aaKnown RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 NR2C2P49116 596 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 TPD52P55327 224 aaPredicted RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 TAS2R39P59534 338 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 PSMD5Q16401 504 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 ZNF789Q5FWF6 425 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 C2orf69Q8N8R5 385 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 OR6K2Q8NGY2 324 aa13.65□□□□□ -0.22
GPC1-209ENST00000495100 SNRNP27Q8WVK2 155 aaKnown RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 FRMD8P1Q9BZ68 369 aaPredicted RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 SENP6Q9GZR1 1112 aaPredicted RBP13.65□□□□□ -0.22
GPC1-209ENST00000495100 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 GCATO75600 419 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 SIX3O95343 332 aaPredicted RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 RPL10P27635 214 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 PIK3R1P27986 724 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 CCNFP41002 786 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 SCNN1BP51168 640 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 TMED1Q13445 227 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 CAPRIN1Q14444 709 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 NAPEPLDQ6IQ20 393 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 OR6Y1Q8NGX8 325 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 SMOQ99835 787 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 STX18Q9P2W9 335 aaKnown RBP13.64□□□□□ -0.23
GPC1-209ENST00000495100 A0A1B0GVG6 124 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 CLGNO14967 610 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 PAGE1O75459 146 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 GGT5P36269 586 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 PPIL2Q13356 520 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 GK3PQ14409 553 aa13.64□□□□□ -0.23
GPC1-209ENST00000495100 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms