RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CCNCP24863 283 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CDH5P33151 784 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 UGT2B10P36537 528 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SERPINB10P48595 397 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CLK3P49761 638 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 NUDT2P50583 147 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 NOMO3P69849 1222 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 BNC1Q01954 994 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 KCNA1Q09470 495 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SEMA5AQ13591 1074 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DPYSL3Q14195 570 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ZBTB49Q6ZSB9 765 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TAS2R42Q7RTR8 314 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 HDDC2Q7Z4H3 204 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DSG4Q86SJ6 1040 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CLEC14AQ86T13 490 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 REM2Q8IYK8 340 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TDRD5Q8NAT2 981 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 OR10Z1Q8NGY1 313 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SLC7A5P2Q9GIP4 190 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DNAI2Q9GZS0 605 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CYP4F11Q9HBI6 524 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 FBXO5Q9UKT4 447 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 COL5A3P25940 1745 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DOCK5Q9H7D0 1870 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CNTNAP4Q9C0A0 1308 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CYB561D2O14569 222 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DCXO43602 365 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 FOXD2O60548 495 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 BANF1O75531 89 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CDK14O94921 469 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CYP2D6P10635 497 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TPSB2P20231 275 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 PCMT1P22061 227 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CCND2P30279 289 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 POLR2IP36954 125 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MRPL19P49406 292 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 PSMC6P62333 389 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 PIGHQ14442 188 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MAPRE2Q15555 327 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TPSAB1Q15661 275 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 LEXMQ3ZCV2 418 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 C5orf22Q49AR2 442 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF544Q6NX49 715 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 B3GNT9Q6UX72 402 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 KCTD20Q7Z5Y7 419 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 BTLAQ7Z6A9 289 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SNX32Q86XE0 403 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CTAGE3PQ8IX95 158 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SVOPQ8N4V2 548 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 LHFPL5Q8TAF8 219 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CAPSLQ8WWF8 208 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ATP6V1E2Q96A05 226 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CENPNQ96H22 339 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 REXO5Q96IC2 774 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MFSD14AQ96MC6 490 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 COG4Q9H9E3 785 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SMYD2Q9NRG4 433 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SNTG2Q9NY99 539 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MYH9P35579 1960 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF646O15015 1829 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 APOC4-APOC2K7ER74 178 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 RIMBP2O15034 1052 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NDUFS2O75306 463 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 LSM8O95777 96 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 APOC2P02655 101 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SERPINB5P36952 375 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SREBF1P36956 1147 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 RAP1GAPP47736 663 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PLA2G16P53816 162 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 EVX2Q03828 476 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF252P-AS1Q0IIN9 211 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZYXQ15942 572 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF786Q8N393 782 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 OR2T34Q8NGX1 318 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 OR2T3Q8NH03 318 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 GABPB2Q8TAK5 448 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SETD6Q8TBK2 473 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 GJA10Q969M2 543 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 YIPF6Q96EC8 236 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PSKH2Q96QS6 385 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 HEMGNQ9BXL5 484 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ANLNQ9NQW6 1124 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 IFT80Q9P2H3 777 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 OSGIN1Q9UJX0 560 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PCDHA11Q9Y5I1 949 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 AHDC1Q5TGY3 1603 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TCRBV7S3A2A0A539 114 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SPDYE2BA6NHP3 402 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 H0Y858 1186 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ERVH48-1M5A8F1 160 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SLC9A3R1O14745 358 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 DFNA5O60443 496 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PPP1R11O60927 126 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 GPIP06744 558 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SPDYE6P0CI01 402 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TSPY3P0CV98 308 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TSPY8P0CW00 308 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms