RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 INTS2Q9H0H0 1204 aaKnown RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 SLC25A18Q9H1K4 315 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 PLEKHB1Q9UF11 243 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 CDH22Q9UJ99 828 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 ICKQ9UPZ9 632 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 LAMP3Q9UQV4 416 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 CNPY2Q9Y2B0 182 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 LRP12Q9Y561 859 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 CC2D2AQ9P2K1 1620 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 A0A1W2PPC1 479 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 RHODO00212 210 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 CEP104O60308 925 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 TULP3O75386 442 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 SGPL1O95470 568 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 URODP06132 367 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 CCKARP32238 428 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 SKIV2L2P42285 1042 aaKnown RBP4.78□□□□□ -1.64
SMC4-224ENST00000494612 SLC12A2P55011 1212 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 TMPRSS3P57727 454 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 PMPCAQ10713 525 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 SEMA3AQ14563 771 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 C5orf22Q49AR2 442 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 MEX3CQ5U5Q3 659 aaKnown RBP4.78□□□□□ -1.64
SMC4-224ENST00000494612 TTLL5Q6EMB2 1281 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 FAM180BQ6P0A1 224 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 TMED8Q6PL24 325 aaPredicted RBP4.78□□□□□ -1.64
SMC4-224ENST00000494612 LRIG3Q6UXM1 1119 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 ZNF793Q6ZN11 406 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 FAM57BQ71RH2 274 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 SETD9Q8NE22 299 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 DNAAF1Q8NEP3 725 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 PPHLN1Q8NEY8 458 aaKnown RBP4.78□□□□□ -1.64
SMC4-224ENST00000494612 CMASQ8NFW8 434 aaPredicted RBP4.78□□□□□ -1.64
SMC4-224ENST00000494612 RFWD2Q8NHY2 731 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 PIGOQ8TEQ8 1089 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 HSPH1Q92598 858 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 EME1Q96AY2 570 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 IFT27Q9BW83 186 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 USP44Q9H0E7 712 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 HIPK3Q9H422 1215 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 EBF3Q9H4W6 596 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 CXorf56Q9H5V9 222 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 ERVK-5Q9HDB9 667 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 PCDHB16Q9NRJ7 776 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 TMEM45AQ9NWC5 275 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 CTNNAL1Q9UBT7 734 aa4.78□□□□□ -1.64
SMC4-224ENST00000494612 CCDC196A0A1B0GTZ2 297 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 OR6C68A6NDL8 312 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 SOCS2O14508 198 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 SLC25A17O43808 307 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 HBP1O60381 514 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 USP12O75317 370 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 IL1AP01583 271 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 HLA-DQA2P01906 255 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 WNT1P04628 370 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 STAT1P42224 750 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 HARS2P49590 506 aaKnown RBP4.77□□□□□ -1.65
SMC4-224ENST00000494612 GEMIN4P57678 1058 aaKnown RBP4.77□□□□□ -1.65
SMC4-224ENST00000494612 HSF1Q00613 529 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 MIDNQ504T8 468 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 ZNF667Q5HYK9 610 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 ENTPD8Q5MY95 495 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 TMEM268Q5VZI3 342 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 FAAH2Q6GMR7 532 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 GJB7Q6PEY0 223 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 MOB3CQ70IA8 216 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 R3HCC1LQ7Z5L2 792 aaKnown RBP4.77□□□□□ -1.65
SMC4-224ENST00000494612 IRF2BP2Q7Z5L9 587 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 NANOGP1Q8N7R0 232 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 NRACQ8N912 160 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 PRSS3P2Q8NHM4 247 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 ADAMTS15Q8TE58 950 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 SKA1Q96BD8 255 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 VCPIP1Q96JH7 1222 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 FUZQ9BT04 418 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 HEMGNQ9BXL5 484 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 ZHX3Q9H4I2 956 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 EPHX3Q9H6B9 360 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 JMJD4Q9H9V9 463 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 VEZTQ9HBM0 779 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 IL1RAPL1Q9NZN1 696 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 PEMTQ9UBM1 199 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 ZNF69Q9UC07 566 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 AASSQ9UDR5 926 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 NAALADL1Q9UQQ1 740 aa4.77□□□□□ -1.65
SMC4-224ENST00000494612 DDTLA6NHG4 134 aaPredicted RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 TSPAN4O14817 238 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 GUCY1B2O75343 617 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 NEURL1O76050 574 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 FGBP02675 491 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 GJC1P36383 396 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 PLCD1P51178 756 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 CFHR1Q03591 330 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 GAD2Q05329 585 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 CAMK1Q14012 370 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 SIM2Q14190 667 aaPredicted RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 TWIST1Q15672 202 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 BAK1Q16611 211 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 TSTQ16762 297 aaKnown RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 CCDC30Q5VVM6 783 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms