RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 NECTIN4Q96NY8 510 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 TSGA13Q96PP4 275 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 RBM15Q96T37 977 aaKnown RBP eCLIP8.19□□□□□ -1.1
FDPS-218ENST00000492887 C2orf49Q9BVC5 232 aaPredicted RBP8.19□□□□□ -1.1
FDPS-218ENST00000492887 FOXP3Q9BZS1 431 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 POMKQ9H5K3 350 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 NOL6Q9H6R4 1146 aaKnown RBP8.19□□□□□ -1.1
FDPS-218ENST00000492887 GLOD4Q9HC38 313 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 ZDHHC18Q9NUE0 388 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 GDE1Q9NZC3 331 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 UBP1Q9NZI7 540 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 IGSF9Q9P2J2 1179 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 SEPT3Q9UH03 358 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 CHMP2BQ9UQN3 213 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 LRRK1Q38SD2 2015 aa8.19□□□□□ -1.1
FDPS-218ENST00000492887 BRWD1Q9NSI6 2320 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TRIOBPQ9H2D6 2365 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TCRBV7S3A2A0A539 114 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 GOLGA6L10A6NI86 522 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 GREM1O60565 184 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 SNAP91O60641 907 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 PMPCBO75439 489 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 ACSL3O95573 720 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CHRM1P11229 460 aaPredicted RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 FOSL2P15408 326 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CD70P32970 193 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CD86P42081 329 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 GEMIN4P57678 1058 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 SESN2P58004 480 aaPredicted RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 RHOAP61586 193 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 DSC2Q02487 901 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 KDSRQ06136 332 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 SLC10A7Q0GE19 358 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 NR1H3Q13133 447 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 SEMA5AQ13591 1074 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 HNRNPDQ14103 355 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 SPARCL1Q14515 664 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 KCNJ11Q14654 390 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 DHCR24Q15392 516 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 SKIDA1Q1XH10 827 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 NAPEPLDQ6IQ20 393 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 LINGO4Q6UY18 593 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 MTSS1LQ765P7 747 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 OTOP3Q7RTS5 596 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TMC3Q7Z5M5 1100 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TMEM25Q86YD3 366 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 PALM2Q8IXS6 379 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 ZBED8Q8IZ13 594 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 APCDD1Q8J025 514 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CPA6Q8N4T0 437 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 NAT8LQ8N9F0 302 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 OR52K2Q8NGK3 314 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TTC8Q8TAM2 541 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 MAML1Q92585 1016 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 IFT43Q96FT9 208 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CFAP36Q96G28 342 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 EXOC2Q96KP1 924 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 C9orf72Q96LT7 481 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TEKT5Q96M29 485 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 MYADMQ96S97 322 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 IL12RB2Q99665 862 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TBL1YQ9BQ87 522 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 FICDQ9BVA6 458 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 FRMD8Q9BZ67 464 aaPredicted RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 POLR1EQ9GZS1 481 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 LINC00597Q9H2U6 94 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CDC42EP4Q9H3Q1 356 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 EBF3Q9H4W6 596 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 LRRC40Q9H9A6 602 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 VPS37BQ9H9H4 285 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 PIH1D1Q9NWS0 290 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 OBP2AQ9NY56 170 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 CLEC1BQ9P126 229 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 SAMD15Q9P1V8 674 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 ZNF212Q9UDV6 495 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 GGA2Q9UJY4 613 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 TBC1D30Q9Y2I9 924 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 AAR2Q9Y312 384 aaKnown RBP8.18□□□□□ -1.1
FDPS-218ENST00000492887 ACTL7AQ9Y615 435 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 MAD1L1Q9Y6D9 718 aa8.18□□□□□ -1.1
FDPS-218ENST00000492887 ZNF106Q9H2Y7 1883 aaKnown RBP8.17□□□□□ -1.1
FDPS-218ENST00000492887 TNRC18O15417 2968 aaPredicted RBP8.17□□□□□ -1.1
FDPS-218ENST00000492887 SMIM23A6NLE4 172 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 BHMG1C9JSJ3 638 aaPredicted RBP8.17□□□□□ -1.1
FDPS-218ENST00000492887 EIF3HO15372 352 aaKnown RBP eCLIP8.17□□□□□ -1.1
FDPS-218ENST00000492887 PPFIA2O75334 1257 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 BANF1O75531 89 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 TMCC1O94876 653 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 IGSF6O95976 241 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 MT-CYBP00156 380 aaPredicted RBP8.17□□□□□ -1.1
FDPS-218ENST00000492887 CYP17A1P05093 508 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 ARSAP15289 507 aa8.17□□□□□ -1.1
FDPS-218ENST00000492887 POLR2EP19388 210 aaKnown RBP8.17□□□□□ -1.1
FDPS-218ENST00000492887 KCNA5P22460 613 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms