RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 BBS2Q9BXC9 721 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 SPATC1LQ9H0A9 340 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 C1orf21Q9H246 121 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ALG9Q9H6U8 611 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 HS6ST1O60243 411 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ADSLP30566 484 aaPredicted RBP21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 RENBPP51606 427 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ADGRE1Q14246 886 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 DCP1BQ8IZD4 617 aaKnown RBP21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ANKRD52Q8NB46 1076 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 RPRD1AQ96P16 312 aaPredicted RBP21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 QKIQ96PU8 341 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 MTG1Q9BT17 334 aaPredicted RBP21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 DDX43Q9NXZ2 648 aaKnown RBP21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CCNFP41002 786 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 EEF1DP3Q658K8 133 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 LCLAT1Q6UWP7 414 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 GK5Q6ZS86 529 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZNF276Q8N554 614 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CSPG4P5Q96PW8 444 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 RHOJQ9H4E5 214 aa21.35■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CRTAMO95727 393 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 OAS1P00973 400 aaKnown RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 MRPL28Q13084 256 aaKnown RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CINPQ9BW66 212 aaPredicted RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 GPR63Q9BZJ6 419 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 VNN1O95497 513 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TCF4P15884 667 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CXCL9Q07325 125 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZNF781Q8N8C0 355 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 VPS37AQ8NEZ2 397 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TMEM216Q9P0N5 145 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 COL20A1Q9P218 1284 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZSCAN9O15535 394 aaPredicted RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CILPO75339 1184 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZNF682O95780 498 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TWF1Q12792 350 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 PPIL2Q13356 520 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 POLD3Q15054 466 aaPredicted RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TRMT10BQ6PF06 316 aaKnown RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TRAF7Q6Q0C0 670 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TMEM26Q6ZUK4 368 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 SZRD1Q7Z422 152 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 PLEKHO2Q8TD55 490 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 KATNAL1Q9BW62 490 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZC4H2Q9NQZ6 224 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 BAZ2AQ9UIF9 1905 aaKnown RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ASNA1O43681 348 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TIPRLO75663 272 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 PPP1R26Q5T8A7 1209 aaPredicted RBP21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 FAM9CQ8IZT9 166 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZNF516Q92618 1163 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 SKA1Q96BD8 255 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TKTL2Q9H0I9 626 aa21.34■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 CLCN5P51795 746 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 RPL26P61254 145 aaKnown RBP21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TOP3AQ13472 1001 aaPredicted RBP21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 SLC7A6OSQ96CW6 309 aaPredicted RBP21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 C5P01031 1676 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 NRP2O60462 931 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 OR56A4Q8NGH8 313 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 C10orf71Q711Q0 1435 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 ZNF862O60290 1169 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TFEBP19484 476 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 TMEM63BQ5T3F8 832 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 FBXL18Q96ME1 805 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 PTPRHQ9HD43 1115 aa21.33■■□□□ 1.01
CHKB-CPT1B-203ENST00000492556 B4GALT5O43286 388 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 CDH3P22223 829 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 MATKP42679 507 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 LIMK2P53671 638 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 CDK18Q07002 472 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 MSS51Q4VC12 460 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 ATG16L2Q8NAA4 619 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 ULBP1Q9BZM6 244 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 ELOVL4Q9GZR5 314 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 OR12D3Q9UGF7 316 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 NUP188Q5SRE5 1749 aa21.33■■□□□ 1
CHKB-CPT1B-203ENST00000492556 H3BRB1 525 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 MDM4O15151 490 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 FAM20BO75063 409 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 LTFP02788 710 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 CTSHP09668 335 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 GNAZP19086 355 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 MSH3P20585 1137 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 JAK1P23458 1154 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 ZIK1Q3SY52 487 aaPredicted RBP21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 ARL13AQ5H913 290 aaPredicted RBP21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 TXNRD3NBQ6F5E7 133 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 SH3BP5LQ7L8J4 393 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 DDX1Q92499 740 aaKnown RBP21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 TUT1Q9H6E5 874 aaKnown RBP21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 TAS2R13Q9NYV9 303 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 SCN11AQ9UI33 1791 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 ERCC2P18074 760 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 LSM12Q3MHD2 195 aaKnown RBP21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 SPATA6LQ8N4H0 392 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 LPGAT1Q92604 370 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 OSBPL6Q9BZF3 934 aa21.32■■□□□ 1
CHKB-CPT1B-203ENST00000492556 SLC15A5A6NIM6 579 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms