RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ABI3BPQ7Z7G0 1075 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 C14orf80Q86SX3 495 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 CIR1Q86X95 450 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 LSMEM2Q8N112 164 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 SLC25A45Q8N413 288 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 PCDH20Q8N6Y1 951 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 FAM181AQ8N9Y4 354 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 OR4C6Q8NH72 309 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ASB12Q8WXK4 309 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 FGF11Q92914 225 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 GRAMD1AQ96CP6 724 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 C18orf8Q96DM3 657 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 LRIG1Q96JA1 1093 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 PSMB7Q99436 277 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 PAIP2Q9BPZ3 127 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 DUSP23Q9BVJ7 150 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 SIX2Q9NPC8 291 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 NCKIPSDQ9NZQ3 722 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 COX16Q9P0S2 106 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 PPARGC1AQ9UBK2 798 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 VPS51Q9UID3 782 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 CLCA2Q9UQC9 943 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 NUMA1Q14980 2115 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 IGSF10Q6WRI0 2623 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 A0A1W2PQU0 124 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 CAPN8A6NHC0 703 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 KPNA3O00505 521 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 TOR1BO14657 336 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 AP1G1O43747 822 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 GRAP2O75791 330 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 CNTN5O94779 1100 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ENDOD1O94919 500 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ADCY5O95622 1261 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 MT-CO1P00395 513 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 CTSLP07711 333 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 CKMT1AP12532 417 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 CYP11B1P15538 503 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 GLDCP23378 1020 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 OR1E1P30953 314 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 MAT2AP31153 395 aaKnown RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 METAP1P53582 386 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 GEMIN4P57678 1058 aaKnown RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 RPS21P63220 83 aaKnown RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 INSM1Q01101 510 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 NRG1Q02297 640 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 TMEM259Q4ZIN3 620 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ALFQ53S48 1182 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 OTUD1Q5VV17 481 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 SLC47A2Q86VL8 602 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ERICH1Q86X53 443 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF677Q86XU0 584 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 MARCH9Q86YJ5 346 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 PASD1Q8IV76 773 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ITFG2Q969R8 447 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 RAB7BQ96AH8 199 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 ISG20Q96AZ6 181 aaKnown RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 FEM1CQ96JP0 617 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 LENG8Q96PV6 779 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-212ENST00000492407 SIK2Q9H0K1 926 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 NDST4Q9H3R1 872 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 PRORYQ9H606 182 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 NLGN3Q9NZ94 848 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 IL36AQ9UHA7 158 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 DAAM1Q9Y4D1 1078 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 AK5Q9Y6K8 562 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 CSNK1G3Q9Y6M4 447 aa9.33□□□□□ -0.92
HDAC3-212ENST00000492407 APC2O95996 2303 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 KNL1Q8NG31 2342 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 A6NNZ2 444 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 CBX4O00257 560 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 TRIM38O00635 465 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 SCAMP1O15126 338 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 TSPAN6O43657 245 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 SIGLEC6O43699 453 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ZMPSTE24O75844 475 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 PIAS2O75928 621 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 DXOO77932 396 aaKnown RBP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 MT-CO3P00414 261 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 NEFHP12036 1026 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 ITGB7P26010 798 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 L1CAMP32004 1257 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 SULT1E1P49888 294 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 SERPINH1P50454 418 aaKnown RBP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 IRAK1P51617 712 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 NEK3P51956 506 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 HNRNPKP61978 463 aaKnown RBP eCLIP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 TPD52L1Q16890 204 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 VWA3BQ502W6 1294 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 CARD16Q5EG05 197 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 CDCP2Q5VXM1 449 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 DPY19L2P1Q6NXN4 242 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 C22orf39Q6P5X5 142 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 IGF2-ASQ6U949 168 aa9.32□□□□□ -0.92
HDAC3-212ENST00000492407 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
HDAC3-212ENST00000492407 XYLT1Q86Y38 959 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms