RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	HDAC8	Q9BY41	377 aa		19.72	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	ST7	Q9NRC1	585 aa		19.72	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	PCDHB4	Q9Y5E5	795 aa		19.72	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	NYNRIN	Q9P2P1	1898 aa	Known RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	TRUB2	O95900	331 aa	Known RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	ACADSB	P45954	432 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	KRT83	P78385	493 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	LRMP	Q12912	555 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	MAPK8IP2	Q13387	824 aa	Predicted RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	UBAP2L	Q14157	1087 aa	Known RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	FOXD4L3	Q6VB84	417 aa	Predicted RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	JAML	Q86YT9	394 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	FBXO39	Q8N4B4	442 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	ATP11C	Q8NB49	1132 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	ZSCAN1	Q8NBB4	408 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	OR2A12	Q8NGT7	310 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	RPRD1A	Q96P16	312 aa	Predicted RBP	19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	BOC	Q9BWV1	1114 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	SEPT10	Q9P0V9	454 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	SPAST	Q9UBP0	616 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	HS3ST2	Q9Y278	367 aa		19.71	■□□□□ 0.75
CDK5RAP2-218	ENST00000491334	NOBOX	O60393	691 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	SRC	P12931	536 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	GP1BB	P13224	206 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ZCWPW2	Q504Y3	356 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	DCAF17	Q5H9S7	520 aa	Predicted RBP	19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ATL3	Q6DD88	541 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	KIAA1161	Q6NSJ0	714 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	FBXL22	Q6P050	247 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	PPP1R16A	Q96I34	528 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	CCDC3	Q9BQI4	270 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ZSWIM1	Q9BR11	485 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	STRADB	Q9C0K7	418 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	POPDC2	Q9HBU9	364 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	KLF15	Q9UIH9	416 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ACSL6	Q9UKU0	697 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	CFAP45	Q9UL16	551 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	OR51B4	Q9Y5P0	310 aa		19.7	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	NOTCH2	Q04721	2471 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	SPTAN1	Q13813	2472 aa	Known RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	RNF225	M0QZC1	329 aa	Predicted RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	FPGT	O14772	594 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	PPFIA2	O75334	1257 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	BRD2	P25440	801 aa	Known RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	RPL34	P49207	117 aa	Known RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	YWHAZ	P63104	245 aa	Known RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	TLE1	Q04724	770 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	SGCG	Q13326	291 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	PDE1C	Q14123	709 aa	Predicted RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	TGIF1	Q15583	401 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ARSI	Q5FYB1	569 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	FOXD4L5	Q5VV16	416 aa	Predicted RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ESRP1	Q6NXG1	681 aa	Known RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	RAB11FIP2	Q7L804	512 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	MED15	Q96RN5	788 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	MUC3B	Q9H195	1237 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	SYNDIG1	Q9H7V2	258 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	PADI4	Q9UM07	663 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	TRPM6	Q9BX84	2022 aa		19.69	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	NTN3	O00634	580 aa	Predicted RBP	19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	CLDN11	O75508	207 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	MT-CO1	P00395	513 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	IGLV3-25	P01717	112 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	CCR1	P32246	355 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	UGT1A5	P35504	534 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	RECQL	P46063	649 aa	Predicted RBP	19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	MTA1	Q13330	715 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	DRAP1	Q14919	205 aa	Predicted RBP	19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	TBR1	Q16650	682 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ZSCAN30	Q86W11	494 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	SLC35F3	Q8IY50	421 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	OR52K2	Q8NGK3	314 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	LENG8	Q96PV6	779 aa	Predicted RBP	19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	SLC25A18	Q9H1K4	315 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	EPB41L5	Q9HCM4	733 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	IL36A	Q9UHA7	158 aa		19.68	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334		A0A1B0GVL5	298 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	LMO7DN	F2Z398	122 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	NVL	O15381	856 aa	Known RBP	19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ANXA6	P08133	673 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	LIPC	P11150	499 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	GPD2	P43304	727 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	NEK3	P51956	506 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	PDX1	P52945	283 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	ADK	P55263	362 aa	Known RBP	19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	EIF4EBP2	Q13542	120 aa	Predicted RBP	19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	AUH	Q13825	339 aa	Known RBP	19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	FGL2	Q14314	439 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	MANEA	Q5SRI9	462 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	C2orf49	Q9BVC5	232 aa	Predicted RBP	19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	THAP9	Q9H5L6	903 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	GEMIN8	Q9NWZ8	242 aa	Known RBP	19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	RCOR1	Q9UKL0	485 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	TBC1D30	Q9Y2I9	924 aa		19.67	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	UNC79	Q9P2D8	2635 aa		19.66	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	RAD51B	O15315	384 aa		19.66	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	GCAT	O75600	419 aa		19.66	■□□□□ 0.74
CDK5RAP2-218	ENST00000491334	PFKFB1	P16118	471 aa		19.66	■□□□□ 0.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms