RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 DBX2Q6ZNG2 339 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 ERN2Q76MJ5 926 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 BNIPLQ7Z465 357 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 CHCHD4Q8N4Q1 142 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 OR7D4Q8NG98 312 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 OR2A12Q8NGT7 310 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 CASKIN2Q8WXE0 1202 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 ISG20Q96AZ6 181 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 TRIM11Q96F44 468 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 KLHDC7BQ96G42 594 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 CNPY3Q9BT09 278 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 ERVMER34-1Q9H9K5 563 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 EPHB6O15197 1021 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 MT-CO1P00395 513 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 TPM3P06753 285 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 SPINK2P20155 84 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 EPHB2P29323 1055 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 L1CAMP32004 1257 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 HTR7P34969 479 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 BNC1Q01954 994 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 SGCGQ13326 291 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 ASIC2Q16515 512 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 ARSIQ5FYB1 569 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 SFMBT2Q5VUG0 894 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 WDR59Q6PJI9 974 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 PLPP6Q8IY26 295 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 ZNF683Q8IZ20 524 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 OR52K2Q8NGK3 314 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 GRIN3AQ8TCU5 1115 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 CENPIQ92674 756 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 MCEEQ96PE7 176 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 PSMB7Q99436 277 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 HDAC8Q9BY41 377 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 TNKS2Q9H2K2 1166 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 ANLNQ9NQW6 1124 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 EVA1BQ9NVM1 165 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 TMEM248Q9NWD8 314 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 DNAI1Q9UI46 699 aa16.9■□□□□ 0.3
PDLIM2-217ENST00000491330 GOLGA8CPA6NN73 597 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 EIF3CLB5ME19 914 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 KCNK3O14649 394 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 FGF10O15520 208 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 DAPK3O43293 454 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 CBFA2T3O75081 653 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 POP4O95707 220 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 YBEYP58557 167 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 RPS21P63220 83 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 AGBL4Q5VU57 503 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 DPY19L3Q6ZPD9 716 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 RAB44Q7Z6P3 723 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 HORMAD1Q86X24 394 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 DCP2Q8IU60 420 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 JOSD2Q8TAC2 188 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 RAB7BQ96AH8 199 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 PCDHB18PQ96TA0 734 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 EIF3CQ99613 913 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 OSBPL1AQ9BXW6 950 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 TMPRSS4Q9NRS4 437 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 HECAQ9UBI9 543 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 SARDHQ9UL12 918 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 SCINQ9Y6U3 715 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 DCHS1Q96JQ0 3298 aa16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 TNRC6BQ9UPQ9 1833 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-217ENST00000491330 K7ERQ8 282 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 SLC31A1O15431 190 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 SMAD6O43541 496 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 BUB1O43683 1085 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 CREB3O43889 395 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 LEFTY1O75610 366 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 LRIG2O94898 1065 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 LDOC1O95751 146 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 HNRNPA2B1P22626 353 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 XPAP23025 273 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 ITGB7P26010 798 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 NXPH1P58417 271 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 FAM193AP78312 1265 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 SCAPQ12770 1279 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 NR1I3Q14994 352 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 ZSCAN23Q3MJ62 389 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 KIAA1161Q6NSJ0 714 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 MON1BQ7L1V2 547 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 MCOLN2Q8IZK6 566 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 FAM131CQ96AQ9 280 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 ZDHHC6Q9H6R6 413 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 CBX8Q9HC52 389 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 MRPL47Q9HD33 250 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 IPO11Q9UI26 975 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 PI4KAP42356 2102 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 CEP192Q8TEP8 1941 aa16.88■□□□□ 0.29
PDLIM2-217ENST00000491330 A0A1W2PQU0 124 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 FAM221BA6H8Z2 402 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 C1QTNF9BB2RNN3 333 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 IGSF6O95976 241 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 C1SP09871 688 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 C1QTNF9P0C862 333 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 HNF1BP35680 557 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 CCNHP51946 323 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 HDAC4P56524 1084 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms