RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ANKRD20A3Q5VUR7 823 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 DEFB123Q8N688 67 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 FAM13CQ8NE31 585 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 MSLNLQ96KJ4 702 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 NACA2Q9H009 215 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 TKTL2Q9H0I9 626 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 BATF3Q9NR55 127 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 HNRNPCL1O60812 293 aaKnown RBP23.23■■□□□ 1.31
USF3-203ENST00000491165 MTDHQ86UE4 582 aaKnown RBP23.23■■□□□ 1.31
USF3-203ENST00000491165 ADAMTS19Q8TE59 1207 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 PABPC5Q96DU9 382 aaKnown RBP23.23■■□□□ 1.31
USF3-203ENST00000491165 KLF6Q99612 283 aaPredicted RBP23.23■■□□□ 1.31
USF3-203ENST00000491165 WDCPQ9H6R7 721 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 RNPEPL1Q9HAU8 725 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 CCL26Q9Y258 94 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 IKBKGQ9Y6K9 419 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 IGLV3-27P01718 113 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 ELK3P41970 407 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 CLNKQ7Z7G1 428 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 RIN3Q8TB24 985 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 GCNAQ96QF7 691 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 MTMR10Q9NXD2 777 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 LNPEPQ9UIQ6 1025 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 FZD10Q9ULW2 581 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 MRPS23Q9Y3D9 190 aaKnown RBP23.22■■□□□ 1.31
USF3-203ENST00000491165 SNX10Q9Y5X0 201 aa23.22■■□□□ 1.31
USF3-203ENST00000491165 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 SCAMP3O14828 347 aaKnown RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 F9P00740 461 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 MBL2P11226 248 aaPredicted RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 PTPN4P29074 926 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 EPHB2P29323 1055 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 STIP1P31948 543 aaKnown RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 TBX4P57082 545 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 TRIP4Q15650 581 aaPredicted RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 DARS2Q6PI48 645 aaKnown RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 LEMD2Q8NC56 503 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 ANKRD27Q96NW4 1050 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 CDK5RAP1Q96SZ6 601 aaKnown RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 KLF16Q9BXK1 252 aaPredicted RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 TRIM55Q9BYV6 548 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 C12orf65Q9H3J6 166 aaKnown RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.21■■□□□ 1.31
USF3-203ENST00000491165 ARHGEF38Q9NXL2 777 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 DCTN4Q9UJW0 460 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 DENND4AQ7Z401 1863 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 KCNU1A8MYU2 1149 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 KIF1CO43896 1103 aaKnown RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 PEX11AO75192 247 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 MOCS2O96007 188 aaPredicted RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 CKMP06732 381 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 HOXB8P17481 243 aaPredicted RBP23.21■■□□□ 1.31
USF3-203ENST00000491165 ADRA1BP35368 520 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 OVGP1Q12889 678 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 GPR153Q6NV75 609 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 RFWD2Q8NHY2 731 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 CPQQ9Y646 472 aa23.21■■□□□ 1.31
USF3-203ENST00000491165 TCRBV9S1A1TA0A576 114 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 FAM72CH0Y354 149 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 SPAG6O75602 509 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 KLKB1P03952 638 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 SRGAP2BP0DMP2 458 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 IRF1P10914 325 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 CALB2P22676 271 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 CCR1P32246 355 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 NOMO1Q15155 1222 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 FAM72AQ5TYM5 149 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 FAM72DQ6L9T8 149 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 FAM72BQ86X60 149 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 IGDCC3Q8IVU1 814 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 CMTM8Q8IZV2 173 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 ST13P5Q8NFI4 369 aaPredicted RBP23.2■■□□□ 1.3
USF3-203ENST00000491165 SLC44A1Q8WWI5 657 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 RNF34Q969K3 372 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 APOPT1Q96IL0 206 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 TSSK1BQ9BXA7 367 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 DONSONQ9NYP3 566 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 NKX1-2Q9UD57 310 aaPredicted RBP23.2■■□□□ 1.3
USF3-203ENST00000491165 AP4E1Q9UPM8 1137 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 H3BQ06 376 aaPredicted RBP23.2■■□□□ 1.3
USF3-203ENST00000491165 STC2O76061 302 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 INHBAP08476 426 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 DESP17661 470 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 WASHC2DQ5SRD0 308 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 ARTNQ5T4W7 220 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 CHSY1Q86X52 802 aa23.2■■□□□ 1.3
USF3-203ENST00000491165 RPL26L1Q9UNX3 145 aaKnown RBP23.2■■□□□ 1.3
USF3-203ENST00000491165 NUP210Q8TEM1 1887 aaPredicted RBP23.19■■□□□ 1.3
USF3-203ENST00000491165 PRAMEF12O95522 483 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 GNAZP19086 355 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 NEK3P51956 506 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 NRLP54845 237 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 CDH6P55285 790 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 KCNJ11Q14654 390 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 KBTBD12Q3ZCT8 623 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 NPNTQ6UXI9 565 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 BZW1Q7L1Q6 419 aaKnown RBP23.19■■□□□ 1.3
USF3-203ENST00000491165 GET4Q7L5D6 327 aaPredicted RBP23.19■■□□□ 1.3
USF3-203ENST00000491165 ZC3H18Q86VM9 953 aaKnown RBP23.19■■□□□ 1.3
USF3-203ENST00000491165 TTC16Q8NEE8 873 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms