RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CDH7Q9ULB5 785 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 CROCCQ5TZA2 2017 aa19.65■□□□□ 0.74
SNAPC3-206ENST00000490969 PSMD12O00232 456 aaPredicted RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 FOXD2O60548 495 aaPredicted RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 FARP2O94887 1054 aaPredicted RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 MPOP05164 745 aa19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 ZFXP17010 805 aaPredicted RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 RPL10P27635 214 aaKnown RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 TGFBIQ15582 683 aa19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 SLC7A14Q8TBB6 771 aa19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 COPS5Q92905 334 aa19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 BORCS5Q969J3 196 aa19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 PAIP1Q9H074 479 aaKnown RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 EIF2B3Q9NR50 452 aaKnown RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 HES2Q9Y543 173 aa19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 COPG1Q9Y678 874 aaKnown RBP19.64■□□□□ 0.74
SNAPC3-206ENST00000490969 A0A087WXM4 84 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 SLC25A27O95847 323 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 JUNP05412 331 aaKnown RBP19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 CYP3A5P20815 502 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 GRIA4P48058 902 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 EFNA5P52803 228 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 PSME3P61289 254 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 HERC6Q8IVU3 1022 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 SLCO4A1Q96BD0 722 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 NIFKQ9BYG3 293 aaKnown RBP19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 SLC38A7Q9NVC3 462 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 TUBA8Q9NY65 449 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 DTLQ9NZJ0 730 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 ZDHHC2Q9UIJ5 367 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 CDC14AQ9UNH5 594 aa19.64■□□□□ 0.73
SNAPC3-206ENST00000490969 MCF2P10911 925 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 RGS7P49802 495 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 PRKAA1Q13131 559 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 KCTD2Q14681 263 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 KCTD21Q4G0X4 260 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 NHSL2Q5HYW2 709 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 SPANXN3Q5MJ09 141 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 DQX1Q8TE96 717 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 FCRL3Q96P31 734 aaPredicted RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 PGLYRP2Q96PD5 576 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 MAGEB5Q9BZ81 275 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 DUS2Q9NX74 493 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 COQ6Q9Y2Z9 468 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 PCDHGA7Q9Y5G6 932 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 MGAMO43451 1857 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 TRIM64CA6NLI5 447 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 TMX2-CTNND1H3BSU7 103 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 PRKCBP05771 671 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 C2P06681 752 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 COL6A2P12110 1019 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 ABCG1P45844 678 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 OXCT1P55809 520 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 ITGA7Q13683 1181 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 BTG3Q14201 252 aaPredicted RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 DPYSL2Q16555 572 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 HACE1Q8IYU2 909 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 PCDH20Q8N6Y1 951 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 URGCPQ8TCY9 931 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 TOP1MTQ969P6 601 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 ACE2Q9BYF1 805 aaPredicted RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 NOL11Q9H8H0 719 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 UTP6Q9NYH9 597 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 HESX1Q9UBX0 185 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 VTI1BQ9UEU0 232 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 DOLKQ9UPQ8 538 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 MFHAS1Q9Y4C4 1052 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 DOCK3Q8IZD9 2030 aa19.63■□□□□ 0.73
SNAPC3-206ENST00000490969 PSMD8P48556 350 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 PRAMEP78395 509 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 KIZQ2M2Z5 673 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 ZNF829Q3KNS6 432 aaPredicted RBP19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 LIPMQ5VYY2 423 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 SPRYD7Q5W111 196 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 HMBOX1Q6NT76 420 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 OLFML1Q6UWY5 402 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 TRIM50Q86XT4 487 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 CPNE9Q8IYJ1 553 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 C1orf127Q8N9H9 656 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 STON2Q8WXE9 905 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 THAP11Q96EK4 314 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 LGMNQ99538 433 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 MID2Q9UJV3 735 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 FUOMA2VDF0 154 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 TRIM43BA6NCK2 446 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 E7ENX8 843 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 SLCO1B7G3V0H7 640 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 ATE1O95260 518 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 GTF2A2P52657 109 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 HSDL1Q3SXM5 330 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 ZBTB49Q6ZSB9 765 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 TFAP2CQ92754 450 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 UHRF1Q96T88 793 aaPredicted RBP19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 AGAP2Q99490 1192 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 MRPL40Q9NQ50 206 aaKnown RBP19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 SELENONQ9NZV5 590 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 TSPAN16Q9UKR8 245 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 ANK1P16157 1881 aa19.62■□□□□ 0.73
SNAPC3-206ENST00000490969 KCNU1A8MYU2 1149 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms