RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TKTL2Q9H0I9 626 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 RSPH9Q9H1X1 276 aaPredicted RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 PDCL3Q9H2J4 239 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM207AQ9NSI2 230 aaPredicted RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FBXL12Q9NXK8 326 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 MPP6Q9NZW5 540 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 TMEM63CQ9P1W3 806 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 TMEM59LQ9UK28 342 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SARDHQ9UL12 918 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SIK3Q9Y2K2 1263 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ACTL7AQ9Y615 435 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 BPTFQ12830 3046 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 A0A0D9SEW6 157 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 A0A1B0GTW7 788 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 A0A1W2PNR3 127 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 DRGXA6NNA5 263 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 F8VZ95 297 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 K7ERQ8 282 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 BCAT2O15382 392 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 TEX33O43247 280 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SMAD6O43541 496 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 OPHN1O60890 802 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 FSBPO95073 299 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SEMA4FO95754 770 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 DNTTP04053 509 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ASLP04424 464 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 WNT1P04628 370 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 CYP1A1P04798 512 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 IGHV4-34P06331 123 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SRPRAP08240 638 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 FAM157BP0CG42 384 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ATP1A3P13637 1013 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF18P17022 549 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ABCB4P21439 1286 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 GLDCP23378 1020 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 EEF1GP26641 437 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 CCR1P32246 355 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC8A1P32418 973 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 MATKP42679 507 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 GATA4P43694 442 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 PSMD8P48556 350 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 CXCR3P49682 368 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 PLK1P53350 603 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ATXN3P54252 364 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 JAM2P57087 298 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ST8SIA6P61647 398 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 DEUP1Q05D60 604 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 PTP4A2Q12974 167 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SYCP1Q15431 976 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 C15orf59Q2T9L4 293 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 KIF19Q2TAC6 998 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SYCP2LQ5T4T6 812 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 FAM102AQ5T9C2 384 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF468Q5VIY5 522 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 RNF219Q5W0B1 726 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF776Q68DI1 518 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 HDDC3Q8N4P3 179 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 AADATQ8N5Z0 425 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 PNPLA1Q8N8W4 532 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 TMEM35BQ8NCS4 154 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 CADM4Q8NFZ8 388 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 OR7D4Q8NG98 312 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 GANCQ8TET4 914 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 NT5C3BQ969T7 300 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 CFAP57Q96MR6 1250 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 RPRD1AQ96P16 312 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 FEM1AQ9BSK4 669 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 BTBD1Q9H0C5 482 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 PABPC3Q9H361 631 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 WDCPQ9H6R7 721 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SYNCQ9H7C4 482 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 TM9SF3Q9HD45 589 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 ARHGEF38Q9NXL2 777 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 LIMA1Q9UHB6 759 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SLC12A6Q9UHW9 1150 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 NOCTQ9UK39 431 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 FNDC3AQ9Y2H6 1198 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 MSRB2Q9Y3D2 182 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 NEUROG3Q9Y4Z2 214 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 SNX11Q9Y5W9 270 aa7.52□□□□□ -1.21
PRPF4B-208ENST00000490653 TMEM131Q92545 1883 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 CABIN1Q9Y6J0 2220 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 TARSL2A2RTX5 802 aaKnown RBP7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 C10orf142B7Z368 130 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 SRGAP2O75044 1071 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 SYPP08247 313 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 UNGP13051 313 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 HOXD12P35452 270 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 SOX5P35711 763 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 BPIFB4P59827 614 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 ATP11AP98196 1134 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 ZNF177Q13360 481 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 DLG2Q15700 870 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 CST6Q15828 149 aa7.51□□□□□ -1.21
PRPF4B-208ENST00000490653 CDO1Q16878 200 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms