RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ACAD10Q6JQN1 1059 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 SHC4Q6S5L8 630 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 MON1AQ86VX9 555 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.22□□□□□ -1.731e-6■■■□□ 18.3
CD46-216ENST00000490278 SLC25A41Q8N5S1 370 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 DPP10Q8N608 796 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 DNAAF1Q8NEP3 725 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 CMASQ8NFW8 434 aaPredicted RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 C16orf52Q8NHV5 167 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 CENPIQ92674 756 aaPredicted RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 ZUFSPQ96AP4 578 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 ZFYVE19Q96K21 471 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 UBA5Q9GZZ9 404 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 TTYH1Q9H313 450 aaPredicted RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 CXorf56Q9H5V9 222 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 PNRC2Q9NPJ4 139 aaKnown RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 ENTPD7Q9NQZ7 604 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 ATP8A2Q9NTI2 1148 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 RNF146Q9NTX7 359 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 TRNAU1APQ9NX07 287 aaKnown RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 TUBA8Q9NY65 449 aaPredicted RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 MSRB1Q9NZV6 116 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 SLC25A10Q9UBX3 287 aaPredicted RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 A0A0G2JK05 382 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 KIF1CO43896 1103 aaKnown RBP4.21□□□□□ -1.74
CD46-216ENST00000490278 CEP104O60308 925 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 MBD4O95243 580 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 ADAP00813 363 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 FGBP02675 491 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 URODP06132 367 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 YWHAQP27348 245 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 CCT4P50991 539 aaKnown RBP4.21□□□□□ -1.74
CD46-216ENST00000490278 CLCNKBP51801 687 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 CASP6P55212 293 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 GAD2Q05329 585 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 CCDC142Q17RM4 750 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 PRICKLE4Q2TBC4 344 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 SYTL3Q4VX76 610 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 TBC1D9BQ66K14 1250 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 HMBOX1Q6NT76 420 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 IL20RBQ6UXL0 311 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 ARMC8Q8IUR7 673 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 CPXM2Q8N436 756 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 NANOGP1Q8N7R0 232 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 DENND1AQ8TEH3 1009 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 RFFLQ8WZ73 363 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 TRMOQ9BU70 441 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 MAF1Q9H063 256 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 VEZTQ9HBM0 779 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 SEMA4BQ9NPR2 832 aaPredicted RBP4.21□□□□□ -1.74
CD46-216ENST00000490278 IL1RAPL1Q9NZN1 696 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 CDH22Q9UJ99 828 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 SLC4A4Q9Y6R1 1079 aa4.21□□□□□ -1.74
CD46-216ENST00000490278 A0A1W2PPC1 479 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 A6NNC1 897 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 ZNF814B7Z6K7 855 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 FAM157AC9JC47 383 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 RNMTO43148 476 aaKnown RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 TOP3BO95985 862 aaKnown RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 F9P00740 461 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 CHRNB1P11230 501 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 UNGP13051 313 aaPredicted RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 BLKP51451 505 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 SRSF1Q07955 248 aaKnown RBP eCLIP4.2□□□□□ -1.743e-6■□□□□ 8.3
CD46-216ENST00000490278 RBMS2Q15434 407 aaKnown RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 INPP5JQ15735 1006 aaPredicted RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 ME3Q16798 604 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 FAM69AQ5T7M9 428 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 PXDC1Q5TGL8 231 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 C17orf99Q6UX52 265 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 RSRC2Q7L4I2 434 aaKnown RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 PRSS45Q7RTY3 260 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 TRIM74Q86UV6 250 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 TRIM73Q86UV7 250 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 PLD5Q8N7P1 536 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 MSI2Q96DH6 328 aaKnown RBP4.2□□□□□ -1.74
CD46-216ENST00000490278 ZHX3Q9H4I2 956 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 TASP1Q9H6P5 420 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 IRAK4Q9NWZ3 460 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 PEMTQ9UBM1 199 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 HEY2Q9UBP5 337 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 COG5Q9UP83 839 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 RAP2CQ9Y3L5 183 aa4.2□□□□□ -1.74
CD46-216ENST00000490278 ARHGAP10A1A4S6 786 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 C17orf102A2RUQ5 167 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 WDR91A4D1P6 747 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 PABPN1LA6NDY0 278 aaKnown RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 DDTLA6NHG4 134 aaPredicted RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 B4E171 279 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 SPTLC2O15270 562 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ATG13O75143 517 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 CD4P01730 458 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 TNFAIP3P21580 790 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 TSPAN7P41732 249 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 DPP6P42658 865 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ARSFP54793 590 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms