RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TKTL2Q9H0I9 626 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 RSPH9Q9H1X1 276 aaPredicted RBP10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 CAPN10Q9HC96 672 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 GPATCH2LQ9NWQ4 482 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 PCSK1NQ9UHG2 260 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 DNAI1Q9UI46 699 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 AMFRQ9UKV5 643 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 VANGL2Q9ULK5 521 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 FZD10Q9ULW2 581 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 NEU3Q9UQ49 428 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 NUP205Q92621 2012 aa10.82□□□□□ -0.68
SCAMP4-208ENST00000489554 METTL12A8MUP2 240 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 MIF4GDA9UHW6 222 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 RIOK3O14730 519 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 SIN3BO75182 1162 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 RNF8O76064 485 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 SYPP08247 313 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 ADRB1P08588 477 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 CD48P09326 243 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 ADRA1BP35368 520 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 CTSOP43234 321 aaPredicted RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 CDH4P55283 916 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 TAZQ16635 292 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 SMTNL2Q2TAL5 461 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 KCNT1Q5JUK3 1230 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 MANEALQ5VSG8 457 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 CXorf57Q6NSI4 855 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 AADACL2Q6P093 401 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 LRRC31Q6UY01 552 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 USP30Q70CQ3 517 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 FAM124AQ86V42 546 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 KATNAL2Q8IYT4 538 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 ZNF683Q8IZ20 524 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 PYROXD2Q8N2H3 581 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 TEKT4Q8WW24 435 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 RAPGEF5Q92565 580 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 TSC1Q92574 1164 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 IGSF8Q969P0 613 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 C1orf74Q96LT6 269 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 NAPGQ99747 312 aaPredicted RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 BTBD1Q9H0C5 482 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 SIK2Q9H0K1 926 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 ZWILCHQ9H900 591 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 L2HGDHQ9H9P8 463 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 SGK2Q9HBY8 427 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 KLHL11Q9NVR0 708 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 NCKAP1Q9Y2A7 1128 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 TBC1D30Q9Y2I9 924 aa10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 TNRC6BQ9UPQ9 1833 aaKnown RBP10.81□□□□□ -0.68
SCAMP4-208ENST00000489554 A0A1B0GTW7 788 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 TTC34A8MYJ7 566 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 FAM72CH0Y354 149 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 ARHGAP33O14559 1287 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 CTIFO43310 598 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 PRPSAP2O60256 369 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 KCNK5O95279 499 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 SEMA4FO95754 770 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 PYGMP11217 842 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 CSRP1P21291 193 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 KCNA4P22459 653 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 IL4RP24394 825 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 MZF1P28698 734 aaPredicted RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 L1CAMP32004 1257 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 GJC1P36383 396 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 MAPK8P45983 427 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 ELAVL3Q14576 367 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 RPS6KA1Q15418 735 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 CST6Q15828 149 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 DPYSL2Q16555 572 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 ERMARDQ5T6L9 678 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 C9orf64Q5T6V5 341 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 FAM72AQ5TYM5 149 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 FAM72DQ6L9T8 149 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 SCYL2Q6P3W7 929 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 C14orf80Q86SX3 495 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 FAM72BQ86X60 149 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 COG1Q8WTW3 980 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 RPL10LQ96L21 214 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 HAPLN3Q96S86 360 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 NCAPGQ9BPX3 1015 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 FEM1AQ9BSK4 669 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 ZDHHC5Q9C0B5 715 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 PABPC3Q9H361 631 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 MTG2Q9H4K7 406 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 PCDH18Q9HCL0 1135 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 SLCO3A1Q9UIG8 710 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 SLC25A13Q9UJS0 675 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 SNX12Q9UMY4 172 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 SNX10Q9Y5X0 201 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
SCAMP4-208ENST00000489554 IGLV3-10A0A075B6K4 115 aa10.79□□□□□ -0.68
SCAMP4-208ENST00000489554 CTAGE9A4FU28 777 aa10.79□□□□□ -0.68
SCAMP4-208ENST00000489554 DRGXA6NNA5 263 aa10.79□□□□□ -0.68
SCAMP4-208ENST00000489554 UPK3BL1B0FP48 263 aa10.79□□□□□ -0.68
SCAMP4-208ENST00000489554 UPK3BL2E5RIL1 263 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms