RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CLEC14AQ86T13 490 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 GBA3Q9H227 469 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 ZNF212Q9UDV6 495 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SMIM24O75264 130 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 PIGNO95427 931 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 COX4I1P13073 169 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 GRK2P25098 689 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SPRP35270 261 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SERPINB8P50452 374 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 ARL13AQ5H913 290 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SNX32Q86XE0 403 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 DPF3Q92784 378 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 NXNL1Q96CM4 212 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SLC45A3Q96JT2 553 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SLC9A7Q96T83 725 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 SIKE1Q9BRV8 207 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 CDH19Q9H159 772 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 AGO3Q9H9G7 860 aaKnown RBP12.89□□□□□ -0.35
CLIC4-202ENST00000488683 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 TNFRSF12AQ9NP84 129 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 CDY2AQ9Y6F7 541 aa12.89□□□□□ -0.35
CLIC4-202ENST00000488683 TXNDC9O14530 226 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
CLIC4-202ENST00000488683 B3GAT3O94766 335 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 ETS2P15036 469 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 RAG1P15918 1043 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 MX2P20592 715 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 CNGA3Q16281 694 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 LSM12Q3MHD2 195 aaKnown RBP12.88□□□□□ -0.35
CLIC4-202ENST00000488683 OR52E8Q6IFG1 317 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 HDAC11Q96DB2 347 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 ECSITQ9BQ95 431 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 MCMBPQ9BTE3 642 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 ACE2Q9BYF1 805 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-202ENST00000488683 SPON1Q9HCB6 807 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 POMPQ9Y244 141 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 LRCH1Q9Y2L9 728 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 USP34Q70CQ2 3546 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 ANKRD12Q6UB98 2062 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
CLIC4-202ENST00000488683 SKIP12755 728 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 AP2B1P63010 937 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 GALNT2Q10471 571 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 KLF10Q13118 480 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 TFAP2DQ7Z6R9 452 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 FSTL5Q8N475 847 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-202ENST00000488683 TMEM151AQ8N4L1 468 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 PCDHB12Q9Y5F1 795 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 TRPM7Q96QT4 1865 aa12.88□□□□□ -0.35
CLIC4-202ENST00000488683 MGEA5O60502 916 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 DPP6P42658 865 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 GPR15P49685 360 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 PSEN1P49768 467 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 GK3PQ14409 553 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 FBXO48Q5FWF7 155 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 RBM20Q5T481 1227 aaKnown RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 STN1Q9H668 368 aaKnown RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 XPR1Q9UBH6 696 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 OR51F1A6NGY5 319 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 FBXO21O94952 628 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 KLHL2O95198 593 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 SLC35E2BP0CK96 405 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 ENO3P13929 434 aaPredicted RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 POLE2P56282 527 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 TRIP10Q15642 601 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 C6orf163Q5TEZ5 329 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 EPGNQ6UW88 154 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 CENPLQ8N0S6 344 aaPredicted RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 DQX1Q8TE96 717 aaKnown RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 TEKT5Q96M29 485 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 PARK7Q99497 189 aaKnown RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 NPAS2Q99743 824 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 DNAI2Q9GZS0 605 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 GMPR2Q9P2T1 348 aaKnown RBP12.87□□□□□ -0.35
CLIC4-202ENST00000488683 ADAM28Q9UKQ2 775 aa12.87□□□□□ -0.35
CLIC4-202ENST00000488683 CCDC189A1A4V9 331 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 SOAT2O75908 522 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 THP07101 528 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms