RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SRRTQ9BXP5 876 aaKnown RBP19.49■□□□□ 0.71
GGPS1-206ENST00000488594 SIK2Q9H0K1 926 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 WDCPQ9H6R7 721 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 FZD3Q9NPG1 666 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 NCKIPSDQ9NZQ3 722 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 IL36AQ9UHA7 158 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 PAXBP1Q9Y5B6 917 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 HS3ST3A1Q9Y663 406 aa19.49■□□□□ 0.71
GGPS1-206ENST00000488594 SETXQ7Z333 2677 aaKnown RBP19.49■□□□□ 0.71
GGPS1-206ENST00000488594 BECN2A8MW95 431 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 K7ERQ8 282 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 LZTS3O60299 673 aaPredicted RBP19.48■□□□□ 0.71
GGPS1-206ENST00000488594 SNAP91O60641 907 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 CSO75390 466 aaKnown RBP19.48■□□□□ 0.71
GGPS1-206ENST00000488594 BMP6P22004 513 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 CLDN2P57739 230 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 PAK1Q13153 545 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 TMEM259Q4ZIN3 620 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 OR6B2Q6IFH4 312 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 KIAA1161Q6NSJ0 714 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 PCSK4Q6UW60 755 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 ZSCAN30Q86W11 494 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 ZDHHC17Q8IUH5 632 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 ZNF397Q8NF99 534 aaPredicted RBP19.48■□□□□ 0.71
GGPS1-206ENST00000488594 NAF1Q96HR8 494 aaKnown RBP19.48■□□□□ 0.71
GGPS1-206ENST00000488594 SYNCQ9H7C4 482 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 THSD1Q9NS62 852 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 GPR27Q9NS67 375 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 DNAJC28Q9NX36 388 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 ARHGEF38Q9NXL2 777 aa19.48■□□□□ 0.71
GGPS1-206ENST00000488594 ZFR2Q9UPR6 939 aaKnown RBP19.48■□□□□ 0.71
GGPS1-206ENST00000488594 H3BM21 787 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 K7ESM1 405 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 CNTN5O94779 1100 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 RRM1P23921 792 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 NEK3P51956 506 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 RPS21P63220 83 aaKnown RBP19.47■□□□□ 0.71
GGPS1-206ENST00000488594 SLC6A3Q01959 620 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 MORC3Q14149 939 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 ARHGAP44Q17R89 818 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 ALFQ53S48 1182 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 ARSIQ5FYB1 569 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 SEL1L3Q68CR1 1132 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 ZCCHC8Q6NZY4 707 aaKnown RBP19.47■□□□□ 0.71
GGPS1-206ENST00000488594 C22orf39Q6P5X5 142 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 IGF2-ASQ6U949 168 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 LRRC31Q6UY01 552 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 KYAT3Q6YP21 454 aaKnown RBP19.47■□□□□ 0.71
GGPS1-206ENST00000488594 PTAR1Q7Z6K3 402 aaPredicted RBP19.47■□□□□ 0.71
GGPS1-206ENST00000488594 PASD1Q8IV76 773 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 GRIN3AQ8TCU5 1115 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 MAPK15Q8TD08 544 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 KCNE4Q8WWG9 221 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 SHC3Q92529 594 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 DPH1Q9BZG8 443 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 TKTL2Q9H0I9 626 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 PIGVQ9NUD9 493 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 APEX2Q9UBZ4 518 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 STAP1Q9ULZ2 295 aa19.47■□□□□ 0.71
GGPS1-206ENST00000488594 ASH1LQ9NR48 2969 aaKnown RBP19.46■□□□□ 0.71
GGPS1-206ENST00000488594 LY6G6EA0A0G2JKS1 128 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 DRGXA6NNA5 263 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 SMAD6O43541 496 aaKnown RBP19.46■□□□□ 0.71
GGPS1-206ENST00000488594 F9P00740 461 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 ERBB2P04626 1255 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 NME1P15531 152 aaKnown RBP19.46■□□□□ 0.71
GGPS1-206ENST00000488594 CXCR3P49682 368 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 STX17P56962 302 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 PTK2Q05397 1052 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 GJB7Q6PEY0 223 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 PARGQ86W56 976 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 ZNF683Q8IZ20 524 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 CHST14Q8NCH0 376 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 C1orf131Q8NDD1 294 aaKnown RBP19.46■□□□□ 0.71
GGPS1-206ENST00000488594 FEM1CQ96JP0 617 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 C1orf74Q96LT6 269 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 NPY6RQ99463 290 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 CRACR2AQ9BSW2 395 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 SLC17A9Q9BYT1 436 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 CEP44Q9C0F1 390 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 CSNK1G3Q9Y6M4 447 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 U3KQA8 63 aa19.46■□□□□ 0.71
GGPS1-206ENST00000488594 ZNF462Q96JM2 2506 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 A0A0D9SEW6 157 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 SPTY2D1-AS1A0A0U1RR47 76 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 LEFTY1O75610 366 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 CSF2P04141 144 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 OR1E1P30953 314 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 KRT9P35527 623 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 RABIFP47224 123 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 SLC20A2Q08357 652 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 ISXQ2M1V0 245 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 RETSATQ6NUM9 610 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 LINGO4Q6UY18 593 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 ZNF783Q6ZMS7 281 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 DPY19L3Q6ZPD9 716 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 ZNF548Q8NEK5 533 aaPredicted RBP19.45■□□□□ 0.7
GGPS1-206ENST00000488594 IFI44Q8TCB0 444 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 COL26A1Q96A83 441 aa19.45■□□□□ 0.7
GGPS1-206ENST00000488594 PGAP3Q96FM1 320 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms