RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PTAR1Q7Z6K3 402 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF683Q8IZ20 524 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 EXD3Q8N9H8 876 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 TMIEQ8NEW7 156 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 TRIM62Q9BVG3 475 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 DUSP23Q9BVJ7 150 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 THAP9Q9H5L6 903 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 FAM204AQ9H8W3 233 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 VPS51Q9UID3 782 aa15.72■□□□□ 0.11
MCF2L-228ENST00000487354 PNMA8BQ9ULN7 279 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-228ENST00000487354 SPTY2D1-AS1A0A0U1RR47 76 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF18P17022 549 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 RRM1P23921 792 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 DUSP3P51452 185 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-228ENST00000487354 LRRC63Q05C16 580 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF177Q13360 481 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-228ENST00000487354 PDCLQ13371 301 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 ALFQ53S48 1182 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 CRTC1Q6UUV9 634 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 ERN2Q76MJ5 926 aaKnown RBP15.71■□□□□ 0.11
MCF2L-228ENST00000487354 EFL1Q7Z2Z2 1120 aaKnown RBP15.71■□□□□ 0.11
MCF2L-228ENST00000487354 DEFB106AQ8N104 65 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 SPATA20Q8TB22 786 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 VOPP1Q96AW1 172 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 KLF6Q99612 283 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-228ENST00000487354 TSG101Q99816 390 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 DDIT4Q9NX09 232 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 HS3ST3A1Q9Y663 406 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 WASF2Q9Y6W5 498 aa15.71■□□□□ 0.11
MCF2L-228ENST00000487354 FLNCQ14315 2725 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 SYNJ2BP-COX16A0A087WUM0 186 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 EME2A4GXA9 379 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-228ENST00000487354 NEMP2A6NFY4 417 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 PAGE1O75459 146 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-228ENST00000487354 CCR1P32246 355 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.1
MCF2L-228ENST00000487354 KRT85P78386 507 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 EIF2B5Q13144 721 aaKnown RBP15.7■□□□□ 0.1
MCF2L-228ENST00000487354 ARL13BQ3SXY8 428 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 LINC00303Q3SY05 128 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 C22orf39Q6P5X5 142 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 PARGQ86W56 976 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 WDTC1Q8N5D0 677 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 GRIN3AQ8TCU5 1115 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 BOCQ9BWV1 1114 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 ABCG4Q9H172 646 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 COX16Q9P0S2 106 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 CSNK1G3Q9Y6M4 447 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 DOPEY2Q9Y3R5 2298 aa15.7■□□□□ 0.1
MCF2L-228ENST00000487354 A0A0D9SEW6 157 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 CPED1A4D0V7 1026 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 CLDN11O75508 207 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 LEFTY1O75610 366 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 PCDH8O95206 1070 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 SLC2A3P11169 496 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 CD44P16070 742 aaKnown RBP15.69■□□□□ 0.1
MCF2L-228ENST00000487354 RBMS1P29558 406 aaKnown RBP15.69■□□□□ 0.1
MCF2L-228ENST00000487354 CDH4P55283 916 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 SRSF1Q07955 248 aaKnown RBP eCLIP15.69■□□□□ 0.1
MCF2L-228ENST00000487354 DEFB133Q30KQ1 61 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 ARSIQ5FYB1 569 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 LINGO4Q6UY18 593 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 RBM44Q6ZP01 1051 aaKnown RBP15.69■□□□□ 0.1
MCF2L-228ENST00000487354 DPY19L3Q6ZPD9 716 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 RBFAQ8N0V3 343 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 ZNF606Q8WXB4 792 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 GRAMD1AQ96CP6 724 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 MED15Q96RN5 788 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 CPXM1Q96SM3 734 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 SLC17A9Q9BYT1 436 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 TNKS2Q9H2K2 1166 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 TCEAL2Q9H3H9 227 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-228ENST00000487354 ZNF212Q9UDV6 495 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 FADS3Q9Y5Q0 445 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 SNX10Q9Y5X0 201 aa15.69■□□□□ 0.1
MCF2L-228ENST00000487354 RELNP78509 3460 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 TERTO14746 1132 aaKnown RBP15.68■□□□□ 0.1
MCF2L-228ENST00000487354 P4HA2O15460 535 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 AQP9O43315 295 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 GCATO75600 419 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 TCEA3O75764 348 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 GRAP2O75791 330 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 PRNPP04156 253 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 ADRB3P13945 408 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 TFE3P19532 575 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-228ENST00000487354 CDK17Q00537 523 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 SRSF6Q13247 344 aaKnown RBP15.68■□□□□ 0.1
MCF2L-228ENST00000487354 KIAA1161Q6NSJ0 714 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 CCDC81Q6ZN84 652 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 DCP2Q8IU60 420 aaKnown RBP15.68■□□□□ 0.1
MCF2L-228ENST00000487354 SLC35F3Q8IY50 421 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 FMR1NBQ8N0W7 255 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-228ENST00000487354 DCAF4L2Q8NA75 395 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 ATP11CQ8NB49 1132 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 EHBP1Q8NDI1 1231 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 FAM174AQ8TBP5 190 aa15.68■□□□□ 0.1
MCF2L-228ENST00000487354 TRIM4Q9C037 500 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms