RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PCDH19Q8TAB3 1148 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 CLEC4CQ8WTT0 213 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 ALG14Q96F25 216 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 SLC17A9Q9BYT1 436 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 SEMA6CQ9H3T2 930 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 SPASTQ9UBP0 616 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 IPO11Q9UI26 975 aaKnown RBP15.58■□□□□ 0.08
U2AF1-211ENST00000486519 ANXA6P08133 673 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 PRF1P14222 555 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 CASP1P29466 404 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 OAS2P29728 719 aaKnown RBP15.57■□□□□ 0.08
U2AF1-211ENST00000486519 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 RAP1GAP2Q684P5 730 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 CXorf57Q6NSI4 855 aaKnown RBP15.57■□□□□ 0.08
U2AF1-211ENST00000486519 SLITRK4Q8IW52 837 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 PDILTQ8N807 584 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 ANKRD52Q8NB46 1076 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 TAS1R2Q8TE23 839 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 TAF4BQ92750 862 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
U2AF1-211ENST00000486519 IRX2Q9BZI1 471 aaPredicted RBP15.57■□□□□ 0.08
U2AF1-211ENST00000486519 NAALADL1Q9UQQ1 740 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 RNF215Q9Y6U7 377 aa15.57■□□□□ 0.08
U2AF1-211ENST00000486519 K7ERQ8 282 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 MT-CO1P00395 513 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
U2AF1-211ENST00000486519 NNMTP40261 264 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 RABIFP47224 123 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 IRAK1P51617 712 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 AP3M2P53677 418 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 DAOAP59103 153 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 PFN3P60673 137 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 ARHGAP44Q17R89 818 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 ARHGAP17Q68EM7 881 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 UNC45BQ8IWX7 931 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 ARL10Q8N8L6 244 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 UBA3Q8TBC4 463 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 GLMNQ92990 594 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 AZIN2Q96A70 460 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 NIF3L1Q9GZT8 377 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 CYP3A43Q9HB55 503 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 ABCC13Q9NSE7 274 aa15.56■□□□□ 0.08
U2AF1-211ENST00000486519 PDZD2O15018 2839 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 NF1P21359 2839 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 CHD5Q8TDI0 1954 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 TYW5A2RUC4 315 aaKnown RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 STMND1H3BQB6 276 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 TMX2-CTNND1H3BSU7 103 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 RIOK3O14730 519 aaKnown RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 XPO1O14980 1071 aaKnown RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 SPTLC2O15270 562 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 ALOX15BO15296 676 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 VPS4BO75351 444 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 FYNP06241 537 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 LCP1P13796 627 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 ITGB7P26010 798 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 CHRNA3P32297 505 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 UGT1A3P35503 534 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 DEFB109BQ30KR1 87 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 ESRP1Q6NXG1 681 aaKnown RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 CCNJLQ8IV13 435 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 OR2A12Q8NGT7 310 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 GRIN3AQ8TCU5 1115 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 LRRC4Q9HBW1 653 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 CASS4Q9NQ75 786 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 TFIP11Q9UBB9 837 aaKnown RBP15.55■□□□□ 0.08
U2AF1-211ENST00000486519 GGT7Q9UJ14 662 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 VPS4AQ9UN37 437 aa15.55■□□□□ 0.08
U2AF1-211ENST00000486519 H3BQV1 296 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 BMP15O95972 392 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 PDGFAP04085 211 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 TACR2P21452 398 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 CD82P27701 267 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 PLK1P53350 603 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 CDC20Q12834 499 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 PHF19Q5T6S3 580 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 KCTD16Q68DU8 428 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 ERN2Q76MJ5 926 aaKnown RBP15.54■□□□□ 0.08
U2AF1-211ENST00000486519 FAM114A1Q8IWE2 563 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 CCAR2Q8N163 923 aaKnown RBP15.54■□□□□ 0.08
U2AF1-211ENST00000486519 SH2D3CQ8N5H7 860 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 IL22RA1Q8N6P7 574 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 GALNT11Q8NCW6 608 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 TCTN2Q96GX1 697 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 SLC39A13Q96H72 371 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 BACH2Q9BYV9 841 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 DMAC2Q9NW81 257 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 TSPAN16Q9UKR8 245 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 SRPRBQ9Y5M8 271 aaKnown RBP15.54■□□□□ 0.08
U2AF1-211ENST00000486519 RP1L1Q8IWN7 2480 aaPredicted RBP15.54■□□□□ 0.08
U2AF1-211ENST00000486519 DNHD1Q96M86 4753 aa15.54■□□□□ 0.08
U2AF1-211ENST00000486519 IGLON5A6NGN9 336 aa15.53■□□□□ 0.08
U2AF1-211ENST00000486519 ZNF891A8MT65 544 aaPredicted RBP15.53■□□□□ 0.08
U2AF1-211ENST00000486519 TRIM49P0CI25 452 aa15.53■□□□□ 0.08
U2AF1-211ENST00000486519 TRIM49CP0CI26 452 aa15.53■□□□□ 0.08
U2AF1-211ENST00000486519 FGF3P11487 239 aaPredicted RBP15.53■□□□□ 0.08
U2AF1-211ENST00000486519 TRIM21P19474 475 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms