RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 BHLHA9Q7RTU4 235 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 LYSMD3Q7Z3D4 306 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 ZC3H18Q86VM9 953 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 PARGQ86W56 976 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 MFN1Q8IWA4 741 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 FRS2Q8WU20 508 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 ZNF592Q92610 1267 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 NKD1Q969G9 470 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 MYEOVQ96EZ4 313 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 AK8Q96MA6 479 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 PRICKLE1Q96MT3 831 aaPredicted RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 CATSPER2Q96P56 530 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 SPAG5Q96R06 1193 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 GFM1Q96RP9 751 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 TWNKQ96RR1 684 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 PCNX1Q96RV3 2341 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 B3GNT4Q9C0J1 378 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 DONSONQ9NYP3 566 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 PADI4Q9UM07 663 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 VPS4AQ9UN37 437 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 ZFR2Q9UPR6 939 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 HBS1LQ9Y450 684 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 HIVEP3Q5T1R4 2406 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 GOLGA6L7A0A1B0GV03 622 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 FRMD3A2A2Y4 597 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 POM121BA6NF01 834 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 A6NNZ2 444 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 GAP43P17677 238 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 HOXD13P35453 343 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 UBA7P41226 1012 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 YWHAGP61981 247 aaKnown RBP eCLIP8.49□□□□□ -1.05
XRN1-212ENST00000486211 ECT2LQ008S8 904 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 CYP24A1Q07973 514 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 EIF2B5Q13144 721 aaKnown RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 ALCAMQ13740 583 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 SNRNP35Q16560 246 aaKnown RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 ZNF699Q32M78 642 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 ZNF667Q5HYK9 610 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 NUGGCQ68CJ6 796 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 KYAT3Q6YP21 454 aaKnown RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 TMPRSS9Q7Z410 1059 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 PTAR1Q7Z6K3 402 aaPredicted RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 UNC93AQ86WB7 457 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 HORMAD1Q86X24 394 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 DCP2Q8IU60 420 aaKnown RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 ZNF557Q8N988 423 aaPredicted RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 LMX1AQ8TE12 382 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 CCDC127Q96BQ5 260 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 CYFIP2Q96F07 1278 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 RPL10LQ96L21 214 aaKnown RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 TMEM74Q96NL1 305 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 IL12RB2Q99665 862 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 TCEAL2Q9H3H9 227 aaPredicted RBP8.49□□□□□ -1.05
XRN1-212ENST00000486211 DKK3Q9UBP4 350 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 SFMBT1Q9UHJ3 866 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 PPM1HQ9ULR3 514 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 TP53TG5Q9Y2B4 290 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 APCP25054 2843 aa8.49□□□□□ -1.05
XRN1-212ENST00000486211 CSMD2Q7Z408 3487 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 SHANK1Q9Y566 2161 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 ZNF891A8MT65 544 aaPredicted RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 LMO7DNF2Z398 122 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 STMND1H3BQB6 276 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 AGRPO00253 132 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 NKX2-8O15522 239 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 MSI1O43347 362 aaKnown RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 DUX1O43812 170 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 VNN1O95497 513 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 IGLV3-27P01718 113 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 RPLP0P05388 317 aaKnown RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 MAPK10P53779 464 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 RPS24P62847 133 aaKnown RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 SRSF11Q05519 484 aaKnown RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 FGL2Q14314 439 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 RAB41Q5JT25 222 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 SEL1L3Q68CR1 1132 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 NADSYN1Q6IA69 706 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 NEK5Q6P3R8 708 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 HEATR4Q86WZ0 1026 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 FAM114A1Q8IWE2 563 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 APCDD1Q8J025 514 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 RBFAQ8N0V3 343 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 ARHGAP18Q8N392 663 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 SDR16C5Q8N3Y7 309 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 PLEKHO2Q8TD55 490 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 GLMNQ92990 594 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 PMEPA1Q969W9 287 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 CCDC74AQ96AQ1 378 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 TMEM159Q96B96 161 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 MOCOSQ96EN8 888 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 TCTN2Q96GX1 697 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 DUSP16Q9BY84 665 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 KIAA1586Q9HCI6 787 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 STIM2Q9P246 746 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 PNMA8BQ9ULN7 279 aaPredicted RBP8.48□□□□□ -1.05
XRN1-212ENST00000486211 DAAM1Q9Y4D1 1078 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 HS3ST3A1Q9Y663 406 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 MTORP42345 2549 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms