RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 SVILO95425 2214 aa9.91□□□□□ -0.82
PTPN7-213ENST00000486116 TYW5A2RUC4 315 aaKnown RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 YJEFN3A6XGL0 299 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 EFCAB7A8K855 629 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 E7ENQ6 273 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 TULP2O00295 520 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 PCDH8O95206 1070 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 PAK4O96013 591 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 ASS1P00966 412 aaKnown RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 TSHRP16473 764 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 NNMTP40261 264 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 CLDN10P78369 228 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 SGSM1Q2NKQ1 1148 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 EIF2S3LQ2VIR3 472 aaKnown RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 DCAF6Q58WW2 860 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 MS4A13Q5J8X5 152 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 TMEM164Q5U3C3 297 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 BSPRYQ5W0U4 402 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 MCTP1Q6DN14 999 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 MSANTD2Q6P1R3 559 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 SV2BQ7L1I2 683 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 CCNJLQ8IV13 435 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 CACNA2D3Q8IZS8 1091 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 PCDH19Q8TAB3 1148 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 PDCD6IPQ8WUM4 868 aaKnown RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 AZIN2Q96A70 460 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 TBATAQ96M53 351 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 KLF6Q99612 283 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 SRRTQ9BXP5 876 aaKnown RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 SLC17A9Q9BYT1 436 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 UBXN6Q9BZV1 441 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
PTPN7-213ENST00000486116 ERRFI1Q9UJM3 462 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-213ENST00000486116 CCDC168Q8NDH2 2452 aa9.9□□□□□ -0.83
PTPN7-213ENST00000486116 ANKRD36A6QL64 1941 aa9.9□□□□□ -0.83
PTPN7-213ENST00000486116 PCSK5Q92824 1860 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ARHGEF17Q96PE2 2063 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 A0A1B0GTL3 188 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 TTLL8A6PVC2 850 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 KPNA3O00505 521 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ATP9BO43861 1147 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ZNF18P17022 549 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 CD58P19256 250 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 TRIM21P19474 475 aaKnown RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 GJB2P29033 226 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 PFN3P60673 137 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 MRPL49Q13405 166 aaKnown RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ACCSLQ4AC99 568 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 EFHC2Q5JST6 749 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 PHF19Q5T6S3 580 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ATP1A1-AS1Q5TC04 95 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ASB18Q6ZVZ8 466 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 EPM2AIP1Q7L775 607 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 CCDC117Q8IWD4 279 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 UNC45BQ8IWX7 931 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-213ENST00000486116 ZNF507Q8TCN5 953 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 PARD3BQ8TEW8 1205 aa9.89□□□□□ -0.83
PTPN7-213ENST00000486116 FPGTO14772 594 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 CAPN5O15484 640 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 BNIP3LO60238 219 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 RAD1O60671 282 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 PDGFAP04085 211 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 FGF3P11487 239 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 PDGFRAP16234 1089 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 RECQLP46063 649 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 AP3M2P53677 418 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 TBX4P57082 545 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 DLG4P78352 724 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 SEPT6Q14141 434 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 TCEA2Q15560 299 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 DLG2Q15700 870 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 ARHGAP44Q17R89 818 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 ZACNQ401N2 412 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 ZNF394Q53GI3 561 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 TCTN3Q6NUS6 607 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 STXBP4Q6ZWJ1 553 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 SPRED1Q7Z699 444 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 TAF4BQ92750 862 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 ERCC4Q92889 916 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 FCRL2Q96LA5 508 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 SLC13A1Q9BZW2 595 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 APOBEC3GQ9HC16 384 aaKnown RBP9.88□□□□□ -0.83
PTPN7-213ENST00000486116 ABCC13Q9NSE7 274 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 GGT7Q9UJ14 662 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 MAP4K5Q9Y4K4 846 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 PCDHGA3Q9Y5H0 932 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 SPG11Q96JI7 2443 aa9.88□□□□□ -0.83
PTPN7-213ENST00000486116 TCP11X1B4DZS4 312 aa9.87□□□□□ -0.83
PTPN7-213ENST00000486116 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPN7-213ENST00000486116 CD2BP2O95400 341 aaKnown RBP9.87□□□□□ -0.83
PTPN7-213ENST00000486116 RPN1P04843 607 aaKnown RBP9.87□□□□□ -0.83
PTPN7-213ENST00000486116 CHRNA3P32297 505 aa9.87□□□□□ -0.83
PTPN7-213ENST00000486116 PLK1P53350 603 aa9.87□□□□□ -0.83
PTPN7-213ENST00000486116 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
PTPN7-213ENST00000486116 SULT2A1Q06520 285 aa9.87□□□□□ -0.83
PTPN7-213ENST00000486116 ADIGQ0VDE8 80 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms