RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CSRP2Q16527 193 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 SYCP2LQ5T4T6 812 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 TXNRD3NBQ6F5E7 133 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 C22orf39Q6P5X5 142 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 ARMCX6Q7L4S7 300 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 POLNQ7Z5Q5 900 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 KIAA2013Q8IYS2 634 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 LZTR1Q8N653 840 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PCDH20Q8N6Y1 951 aaKnown RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PIGKQ92643 395 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 HMCESQ96FZ2 354 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 ZNF419Q96HQ0 510 aaPredicted RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 OMDQ99983 421 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 GPR174Q9BXC1 333 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 BTBD1Q9H0C5 482 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 TNKS2Q9H2K2 1166 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 LRRC19Q9H756 370 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 SGK2Q9HBY8 427 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PARD6AQ9NPB6 346 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 SEMA4GQ9NTN9 838 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PPM1HQ9ULR3 514 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 EPN1Q9Y6I3 576 aaPredicted RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 THADAQ6YHU6 1953 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 ARHGAP42A6NI28 874 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 C1QTNF3-AMACRE9PGA6 284 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 RNASEH2AO75792 299 aaKnown RBP12.69□□□□□ -0.38
HMG20B-211ENST00000486028 ZNF806P0C7X5 589 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 TGM1P22735 817 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 CHRNA3P32297 505 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 NOP2P46087 812 aaKnown RBP12.69□□□□□ -0.38
HMG20B-211ENST00000486028 TERF1P54274 439 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 CDH6P55285 790 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 DSG2Q14126 1118 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 CARD16Q5EG05 197 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 WDR45BQ5MNZ6 344 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 PLA2G2CQ5R387 149 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 ZSCAN30Q86W11 494 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 SYT12Q8IV01 421 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 MAP7D3Q8IWC1 876 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 HDDC3Q8N4P3 179 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 OR2A12Q8NGT7 310 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 CASKIN2Q8WXE0 1202 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 CELF6Q96J87 481 aaKnown RBP12.69□□□□□ -0.38
HMG20B-211ENST00000486028 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 CSPG4P5Q96PW8 444 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 BAG1Q99933 345 aaPredicted RBP12.69□□□□□ -0.38
HMG20B-211ENST00000486028 NEUROG2Q9H2A3 272 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 PCDH18Q9HCL0 1135 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 RCOR3Q9P2K3 495 aaPredicted RBP12.69□□□□□ -0.38
HMG20B-211ENST00000486028 FZD4Q9ULV1 537 aa12.69□□□□□ -0.38
HMG20B-211ENST00000486028 FCF1Q9Y324 198 aaKnown RBP12.69□□□□□ -0.38
HMG20B-211ENST00000486028 A0A1W2PP55 124 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 SOWAHDA6NJG2 315 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 METTL12A8MUP2 240 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 NDUFA10O95299 355 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 SEMA4FO95754 770 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 CD160O95971 181 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 PRNPP04156 253 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 AMPD1P23109 780 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 ITPKAP23677 461 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 ACSL1P33121 698 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 HOXD12P35452 270 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 GJC1P36383 396 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 SLC1A1P43005 524 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 PAPOLAP51003 745 aaKnown RBP12.68□□□□□ -0.38
HMG20B-211ENST00000486028 LMNB2Q03252 620 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 CCDC15Q0P6D6 951 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 PDK2Q15119 407 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 CCDC6Q16204 474 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 INO80DQ53TQ3 878 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-211ENST00000486028 ZFYVE27Q5T4F4 411 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 AFMIDQ63HM1 303 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 TMCO3Q6UWJ1 677 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 DPY19L3Q6ZPD9 716 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 RABEPKQ7Z6M1 372 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 SLC41A1Q8IVJ1 513 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 AADATQ8N5Z0 425 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 C12orf50Q8NA57 414 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-211ENST00000486028 TMIEQ8NEW7 156 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 PIP4K2CQ8TBX8 421 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 SLC39A8Q9C0K1 460 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 KLC2Q9H0B6 622 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 IL36AQ9UHA7 158 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 PILRBQ9UKJ0 227 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 ACTL7AQ9Y615 435 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
HMG20B-211ENST00000486028 LRRC72A6NJI9 287 aa12.67□□□□□ -0.38
HMG20B-211ENST00000486028 MEI4A8MW99 385 aa12.67□□□□□ -0.38
HMG20B-211ENST00000486028 DFFAO00273 331 aa12.67□□□□□ -0.38
HMG20B-211ENST00000486028 KHNYNO15037 678 aaKnown RBP12.67□□□□□ -0.38
HMG20B-211ENST00000486028 SLC7A4O43246 635 aa12.67□□□□□ -0.38
HMG20B-211ENST00000486028 PRAMEF11O60813 436 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms