RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 RENBPP51606 427 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 NRLP54845 237 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 GEMIN4P57678 1058 aaKnown RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 NSUN2Q08J23 767 aaKnown RBP eCLIP16.12■□□□□ 0.17
APOE-205ENST00000485628 AP1B1Q10567 949 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 LBRQ14739 615 aaKnown RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 DGKKQ5KSL6 1271 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 EMC10Q5UCC4 262 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 DARS2Q6PI48 645 aaKnown RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 CCDC137Q6PK04 289 aaKnown RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 LINGO4Q6UY18 593 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 METTL3Q86U44 580 aaKnown RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 MMGT1Q8N4V1 131 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 GLIS1Q8NBF1 620 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 TADA1Q96BN2 335 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 TEKT5Q96M29 485 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 MGME1Q9BQP7 344 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 CEP44Q9C0F1 390 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 CD248Q9HCU0 757 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 LHX3Q9UBR4 397 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 UBA2Q9UBT2 640 aaPredicted RBP16.12■□□□□ 0.17
APOE-205ENST00000485628 BDP1A6H8Y1 2624 aa16.12■□□□□ 0.17
APOE-205ENST00000485628 TECTAO75443 2155 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 TMCC1O94876 653 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 CSNK1DP48730 415 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 NUMBP49757 651 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 STK19P49842 368 aaPredicted RBP16.11■□□□□ 0.17
APOE-205ENST00000485628 GRSF1Q12849 480 aaKnown RBP eCLIP16.11■□□□□ 0.17
APOE-205ENST00000485628 ZNF234Q14588 700 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 IHHQ14623 411 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 FBXO43Q4G163 708 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 HEATR6Q6AI08 1181 aaKnown RBP16.11■□□□□ 0.17
APOE-205ENST00000485628 ZNF852Q6ZMS4 543 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 NUDT18Q6ZVK8 323 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 ZNF567Q8N184 647 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 CEP112Q8N8E3 955 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 FAM71DQ8N9W8 422 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 CYB5D2Q8WUJ1 264 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 RPL10LQ96L21 214 aaKnown RBP16.11■□□□□ 0.17
APOE-205ENST00000485628 NSMCE3Q96MG7 304 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 RUNDC3BQ96NL0 473 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 SP110Q9HB58 689 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 TRHDEQ9UKU6 1024 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 ZNF148Q9UQR1 794 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 TTC28Q96AY4 2481 aa16.11■□□□□ 0.17
APOE-205ENST00000485628 ATG2BQ96BY7 2078 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 KANSL1LA0AUZ9 987 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 RNF103O00237 685 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 KCNN4O15554 427 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 JCHAINP01591 159 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 CD72P21854 359 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 IVDP26440 423 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 LMNB2Q03252 620 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 P3H1Q32P28 736 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
APOE-205ENST00000485628 ANKRD20A2Q5SQ80 823 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 FAM182AQ5T1J6 154 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 ANKRD20A1Q5TYW2 823 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 MARC1Q5VT66 337 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 ANKRD20A3Q5VUR7 823 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 EGFLAMQ63HQ2 1017 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 LEKR1Q6ZMV7 388 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 TSEN2Q8NCE0 465 aaKnown RBP16.1■□□□□ 0.17
APOE-205ENST00000485628 LRRN4CLQ8ND94 238 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 ARRDC2Q8TBH0 407 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 EDAQ92838 391 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 SHDQ96IW2 340 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 NELL2Q99435 816 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 GORASP1Q9BQQ3 440 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 CARD6Q9BX69 1037 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 OSBPL6Q9BZF3 934 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 LTB4R2Q9NPC1 389 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 RBM22Q9NW64 420 aaKnown RBP eCLIP16.1■□□□□ 0.17
APOE-205ENST00000485628 SEPT3Q9UH03 358 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 FEZ2Q9UHY8 353 aaPredicted RBP16.1■□□□□ 0.17
APOE-205ENST00000485628 CA14Q9ULX7 337 aa16.1■□□□□ 0.17
APOE-205ENST00000485628 MTF2Q9Y483 593 aaPredicted RBP16.1■□□□□ 0.17
APOE-205ENST00000485628 CTAGE15A4D2H0 777 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 ZBTB24O43167 697 aaPredicted RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 OPHN1O60890 802 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 HLA-DQB2P05538 268 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 CTAGE8P0CG41 777 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 TARSP26639 723 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 MMP13P45452 471 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 RGRP47804 291 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 MRPS21P82921 87 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 DHX34Q14147 1143 aaKnown RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 E2F5Q15329 346 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 DLG2Q15700 870 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 HSF5Q4G112 596 aaPredicted RBP16.09■□□□□ 0.17
APOE-205ENST00000485628 CTAGE6Q86UF2 777 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 CTAGE4Q8IX94 777 aa16.09■□□□□ 0.17
APOE-205ENST00000485628 SYNPOQ8N3V7 929 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms