RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PEX19P40855 299 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TOB1P50616 345 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ADCY7P51828 1080 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF134P52741 427 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 RPL15P61313 204 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ATP2C1P98194 919 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TIAL1Q01085 375 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 CBX3Q13185 183 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 SLC14A1Q13336 389 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ALCAMQ13740 583 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 SNTB1Q13884 538 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 CST9LP1Q5W188 147 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TRAT1Q6PIZ9 186 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 MTHFD1LQ6UB35 978 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 SLC30A10Q6XR72 485 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 MSANTD1Q6ZTZ1 278 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ERN2Q76MJ5 926 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TUSC5Q8IXB3 177 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ANKRD53Q8N9V6 530 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 PSD4Q8NDX1 1056 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 DENND1AQ8TEH3 1009 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 DUSP19Q8WTR2 217 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 CNOT9Q92600 299 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 KLHL15Q96M94 604 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 RUNDC3BQ96NL0 473 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ATP6V0BQ99437 205 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 NAA11Q9BSU3 229 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ANP32EQ9BTT0 268 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 STRA6Q9BX79 667 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ANKRD2Q9GZV1 360 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 CLPBQ9H078 707 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 OSGEPL1Q9H4B0 414 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 THAP9Q9H5L6 903 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 CXorf36Q9H7Y0 433 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 FBRSL1Q9HCM7 1045 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 MID1IP1Q9NPA3 183 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 SNTG1Q9NSN8 517 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 THAP1Q9NVV9 213 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 IL1RAPL1Q9NZN1 696 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 DNAJB9Q9UBS3 223 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 AMACRQ9UHK6 382 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ANAPC2Q9UJX6 822 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 NDRG4Q9ULP0 352 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 LIPT1Q9Y234 373 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 PTRH2Q9Y3E5 179 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ADAM18Q9Y3Q7 739 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TRBC2A0A5B9 178 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ARHGEF37A1IGU5 675 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 LRRD1A4D1F6 860 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ADM5C9JUS6 153 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF213O14771 459 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF263O14978 683 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 SCAMP1O15126 338 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 PRPF4O43172 522 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TXNL1O43396 289 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 RECQL5O94762 991 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 CYP3A4P08684 503 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 DLDP09622 509 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ERCC2P18074 760 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 CHRM3P20309 590 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 DRD1P21728 446 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 FGFR4P22455 802 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 HNF1BP35680 557 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 BMPR1AP36894 532 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 POLGP54098 1239 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 MFAP4P55083 255 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 FAM3BP58499 235 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TLE3Q04726 772 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 CSTF3Q12996 717 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TYSND1Q2T9J0 566 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 GLRA4Q5JXX5 417 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 GKAP1Q5VSY0 366 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 FAM171A1Q5VUB5 890 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TAPT1Q6NXT6 567 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TMEM81Q6P7N7 255 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 PCSK4Q6UW60 755 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TMEM108Q6UXF1 575 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 PARS2Q7L3T8 475 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 SLC46A3Q7Z3Q1 461 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ANKRD13BQ86YJ7 626 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 IL17RCQ8NAC3 791 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 ZBTB8BQ8NAP8 495 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 C11orf65Q8NCR3 313 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 CADM4Q8NFZ8 388 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 CTCFLQ8NI51 663 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 FIBINQ8TAL6 211 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TFAP2CQ92754 450 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 MIEF2Q96C03 454 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 BICD1Q96G01 975 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 C16orf45Q96MC5 204 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TMEM237Q96Q45 408 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 SPXQ9BT56 116 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 NPLQ9BXD5 320 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 C1orf21Q9H246 121 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 EPHX3Q9H6B9 360 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 IL1RAPL2Q9NP60 686 aa4.66□□□□□ -1.66
PTCD3-214ENST00000483925 MBNL1Q9NR56 388 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 TLR8Q9NR97 1041 aaKnown RBP4.66□□□□□ -1.66
PTCD3-214ENST00000483925 SIRT3Q9NTG7 399 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms