RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SLITRK5O94991 958 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 DNTTP04053 509 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 CAPNS1P04632 268 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 ATP5BP06576 529 aaKnown RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TRIM49P0CI25 452 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TRIM49CP0CI26 452 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 GLB1P16278 677 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 PRKCHP24723 683 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 COL8A1P27658 744 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 NOS3P29474 1203 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 GTF2H1P32780 548 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TKTL1P51854 596 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 COPAP53621 1224 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 GYS2P54840 703 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 ZBTB16Q05516 673 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 PPP3CAQ08209 521 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TCEA2Q15560 299 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 NFIL3Q16649 462 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 COL28A1Q2UY09 1125 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TTC31Q49AM3 519 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 FNDC3BQ53EP0 1204 aaKnown RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 RAB41Q5JT25 222 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 C1orf220Q5T0J3 134 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 KRT39Q6A163 491 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 LETMD1Q6P1Q0 360 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 C19orf48Q6RUI8 117 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TMPRSS7Q7RTY8 843 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 SLCO6A1Q86UG4 719 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 FAM124AQ86V42 546 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 FAM186BQ8IYM0 893 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 AHI1Q8N157 1196 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 ZNF557Q8N988 423 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 ANKRD52Q8NB46 1076 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 MDM1Q8TC05 714 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TAS1R2Q8TE23 839 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 RNF139Q8WU17 664 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 WFDC12Q8WWY7 111 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 SORCS1Q8WY21 1168 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 GOLGA1Q92805 767 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TMA16Q96EY4 203 aaKnown RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TMEM176AQ96HP8 235 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 BRINP2Q9C0B6 783 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 IL21RQ9HBE5 538 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 LRRC4Q9HBW1 653 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 TMEM8AQ9HCN3 771 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 CISHQ9NSE2 258 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 HESX1Q9UBX0 185 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 HBS1LQ9Y450 684 aaKnown RBP6.11□□□□□ -1.43
CSDE1-207ENST00000483407 IGF2RP11717 2491 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 ZZEF1O43149 2961 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 PTPRDP23468 1912 aa6.11□□□□□ -1.43
CSDE1-207ENST00000483407 SPEGQ15772 3267 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 BPTFQ12830 3046 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 A0A1B0GVL5 298 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 A0A1W2PQU0 124 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 TYW5A2RUC4 315 aaKnown RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 XPO1O14980 1071 aaKnown RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SHOXO15266 292 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 TNFSF14O43557 240 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 PCDHGA12O60330 932 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 DFNA5O60443 496 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 TSPAN3O60637 253 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 RHOBTB3O94955 611 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 FSBPO95073 299 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SEMA4FO95754 770 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 LATS1O95835 1130 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ZBED1O96006 694 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 EPB41P11171 864 aaKnown RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 HLA-EP13747 358 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 PFKFB1P16118 471 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 RAB6AP20340 208 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 CMA1P23946 247 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 HOXD9P28356 352 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 HLA-FP30511 346 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ACSL1P33121 698 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 GRK6P43250 576 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SYKP43405 635 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 CSNK1EP49674 416 aaKnown RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 MXI1P50539 228 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 CCT8P50990 548 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 BCAT1P54687 386 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 RAD23BP54727 409 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 C21orf59P57076 290 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 YWHAEP62258 255 aaKnown RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ADAM9Q13443 819 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 KIF19Q2TAC6 998 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 TMEM215Q68D42 235 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ARHGAP17Q68EM7 881 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 PM20D1Q6GTS8 502 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 DBX2Q6ZNG2 339 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 CHST9Q7L1S5 443 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 FMNL3Q8IVF7 1028 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 HSCBQ8IWL3 235 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms