RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ENDOD1O94919 500 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SMC2O95347 1197 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 PAK4O96013 591 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SRCP12931 536 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 TGM2P21980 687 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 RRM1P23921 792 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 RBMS1P29558 406 aaKnown RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 HNRNPKP61978 463 aaKnown RBP eCLIP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 KRT83P78385 493 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 KCNC4Q03721 635 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 NME3Q13232 169 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 FZD2Q14332 565 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 CDKN3Q16667 212 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 ARSIQ5FYB1 569 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 C3orf38Q5JPI3 329 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 KIAA1614Q5VZ46 1190 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 ISM2Q6H9L7 571 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 OR6B2Q6IFH4 312 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 FOXR1Q6PIV2 292 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 LINGO4Q6UY18 593 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 GCNT7Q6ZNI0 430 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 ERN2Q76MJ5 926 aaKnown RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 CHST14Q8NCH0 376 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 TMIEQ8NEW7 156 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SNRNP27Q8WVK2 155 aaKnown RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 ATXN7L3BQ96GX2 97 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 CEP63Q96MT8 703 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SLC46A1Q96NT5 459 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 PSMB7Q99436 277 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 DUSP23Q9BVJ7 150 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 GTPBP4Q9BZE4 634 aaKnown RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 CLMPQ9H6B4 373 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 USP29Q9HBJ7 922 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 UBE2TQ9NPD8 197 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 EVA1BQ9NVM1 165 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 SATB2Q9UPW6 733 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 HS3ST2Q9Y278 367 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 TBC1D30Q9Y2I9 924 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 HS3ST4Q9Y661 456 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 HS3ST3A1Q9Y663 406 aa7.56□□□□□ -1.2
CSDE1-206ENST00000483030 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-206ENST00000483030 MGAQ8IWI9 3026 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 A6NNZ2 444 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 PSMA7O14818 248 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 RAD51BO15315 384 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 SLC28A2O43868 658 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 PAGE1O75459 146 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 PRNPP04156 253 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 GLI1P08151 1106 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 GNA15P30679 374 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 CDH4P55283 916 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 PDCLQ13371 301 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 FGL2Q14314 439 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 ALFQ53S48 1182 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 EFHC1Q5JVL4 640 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 ZCCHC8Q6NZY4 707 aaKnown RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 GUSBP11Q6P575 273 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 CRTC1Q6UUV9 634 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 EFL1Q7Z2Z2 1120 aaKnown RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 PTAR1Q7Z6K3 402 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 DCP2Q8IU60 420 aaKnown RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 FMR1NBQ8N0W7 255 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 WDTC1Q8N5D0 677 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF548Q8NEK5 533 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 GRIN3AQ8TCU5 1115 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 SMARCE1Q969G3 411 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 CCDC97Q96F63 343 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 MED8Q96G25 268 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 DHTKD1Q96HY7 919 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 FEM1CQ96JP0 617 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 CCDC114Q96M63 670 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 SLC2A13Q96QE2 648 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 CPXM1Q96SM3 734 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 C2orf49Q9BVC5 232 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 HDAC8Q9BY41 377 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 SLC17A9Q9BYT1 436 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 INTS2Q9H0H0 1204 aaKnown RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 TNKS2Q9H2K2 1166 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 IPO11Q9UI26 975 aaKnown RBP7.55□□□□□ -1.2
CSDE1-206ENST00000483030 VPS51Q9UID3 782 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 KLF15Q9UIH9 416 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 ENTPD2Q9Y5L3 495 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 CSNK1G3Q9Y6M4 447 aa7.55□□□□□ -1.2
CSDE1-206ENST00000483030 A0A0D9SEW6 157 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 SPTY2D1-AS1A0A0U1RR47 76 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 PMS2P1A4D2B8 440 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 H3BM21 787 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 K7ENP7 123 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 M0QYT0 321 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 CASC3O15234 703 aaKnown RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 AQP9O43315 295 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 HSF2BPO75031 334 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 LEFTY1O75610 366 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 WISP1O95388 367 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 ADCY5O95622 1261 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 CSF2P04141 144 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 RHOCP08134 193 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms