RNA–Protein interactions for RNA: ENST00000482769.1

IGKV2-28-201, Transcript of immunoglobulin kappa variable 2-28, humanhuman

APPRIS P1 BASIC

Gene IGKV2-28, Length 390 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28-201ENST00000482769 CLPBQ9H078 707 aa11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 NUCKS1Q9H1E3 243 aaKnown RBP11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 LRRN3Q9H3W5 708 aa11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 SIRPGQ9P1W8 387 aa11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 SPASTQ9UBP0 616 aa11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 GULP1Q9UBP9 304 aa11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 CFAP45Q9UL16 551 aa11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 SRPRBQ9Y5M8 271 aaKnown RBP11.26□□□□□ -0.61
IGKV2-28-201ENST00000482769 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 CHD5Q8TDI0 1954 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 NF1P21359 2839 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 YJEFN3A6XGL0 299 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ZNF891A8MT65 544 aaPredicted RBP11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 E7ENQ6 273 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 RNF103O00237 685 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 SPTLC2O15270 562 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 NKX2-8O15522 239 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 BNIP3LO60238 219 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 PPP6R2O75170 966 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 CNTN5O94779 1100 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 YEATS4O95619 227 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 DDAH2O95865 285 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 BMP15O95972 392 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ASS1P00966 412 aaKnown RBP11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 CTSLP07711 333 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ANXA6P08133 673 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ITGB7P26010 798 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 RABIFP47224 123 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ZFP36L1Q07352 338 aaKnown RBP11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 C16orf72Q14CZ0 275 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 BSPRYQ5W0U4 402 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 PM20D1Q6GTS8 502 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 CLEC17AQ6ZS10 378 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 CCDC117Q8IWD4 279 aaPredicted RBP11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 PHACTR4Q8IZ21 702 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ARL10Q8N8L6 244 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 TEX19Q8NA77 164 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 TMEM159Q96B96 161 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 GDPD2Q9HCC8 539 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 CASS4Q9NQ75 786 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 IPO11Q9UI26 975 aaKnown RBP11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 HS3ST3A1Q9Y663 406 aa11.25□□□□□ -0.61
IGKV2-28-201ENST00000482769 DIDO1Q9BTC0 2240 aaKnown RBP11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 EFCAB7A8K855 629 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 TULP2O00295 520 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 KPNA3O00505 521 aaPredicted RBP11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 MCF2LO15068 1137 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 ALOX15BO15296 676 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 YY2O15391 372 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 CCL4P13236 92 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 TSHRP16473 764 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 ZNF18P17022 549 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 CD58P19256 250 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 OAS2P29728 719 aaKnown RBP11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 UGT1A3P35503 534 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 ADIGQ0VDE8 80 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 CDC20Q12834 499 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 STK38Q15208 465 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 ACCSLQ4AC99 568 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 ZNF394Q53GI3 561 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 MS4A13Q5J8X5 152 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 STXBP4Q6ZWJ1 553 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 PARD3BQ8TEW8 1205 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 APOBEC4Q8WW27 367 aaKnown RBP11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 MOCOSQ96EN8 888 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 EPAS1Q99814 870 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 DONSONQ9NYP3 566 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 RNF215Q9Y6U7 377 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 APCP25054 2843 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
IGKV2-28-201ENST00000482769 SPG11Q96JI7 2443 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 EIF3DO15371 548 aaKnown RBP eCLIP11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 PAK4O96013 591 aaPredicted RBP11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 PRF1P14222 555 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 DLG4P78352 724 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 CLDN10P78369 228 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 KRT85P78386 507 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 TCEA2Q15560 299 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 DEFB109BQ30KR1 87 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 ZACNQ401N2 412 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 PHF19Q5T6S3 580 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 TMEM164Q5U3C3 297 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 RRAGBQ5VZM2 374 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 MSANTD2Q6P1R3 559 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 SHC4Q6S5L8 630 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 CCNJLQ8IV13 435 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 SLITRK4Q8IW52 837 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 UNC45BQ8IWX7 931 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 NELFCDQ8IXH7 590 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
IGKV2-28-201ENST00000482769 CPT1CQ8TCG5 803 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms