RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 KCNK9Q9NPC2 374 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 FSCN3Q9NQT6 498 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 PRDM8Q9NQV8 689 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 PDP2Q9P2J9 529 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 SRP68Q9UHB9 627 aaKnown RBP4.1□□□□□ -1.75
GTF3A-207ENST00000482655 MSH6P52701 1360 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 ATRNO75882 1429 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 MST1RQ04912 1400 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 CEP162Q5TB80 1403 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 ADGRB3O60242 1522 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 GLI3P10071 1580 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 LAMC1P11047 1609 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 NRXN3Q9Y4C0 1643 aa4.1□□□□□ -1.75
GTF3A-207ENST00000482655 A0A0G2JK05 382 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 LACTBL1A8MY62 500 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 PCDH17O14917 1159 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 DHHO43323 396 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 TAF5LO75529 589 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 NFATC1O95644 943 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 PYGLP06737 847 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 PEPDP12955 493 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 GYS1P13807 737 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 ACTR2P61160 394 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 LMOD3Q0VAK6 560 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 EFR3AQ14156 821 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 GRM4Q14833 912 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 KLHL22Q53GT1 634 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 ZNF569Q5MCW4 686 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 PIK3CD-AS1Q5SR53 167 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 WDR78Q5VTH9 848 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 OR52N4Q8NGI2 321 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 GOLGA1Q92805 767 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 EME1Q96AY2 570 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 MCRS1Q96EZ8 462 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 PPM1MQ96MI6 270 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 EIF2AK1Q9BQI3 630 aaKnown RBP4.09□□□□□ -1.75
GTF3A-207ENST00000482655 WDR83Q9BRX9 315 aaKnown RBP4.09□□□□□ -1.75
GTF3A-207ENST00000482655 RBM38Q9H0Z9 239 aaKnown RBP4.09□□□□□ -1.75
GTF3A-207ENST00000482655 TASP1Q9H6P5 420 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 RIC8AQ9NPQ8 531 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 NDUFAF4Q9P032 175 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 SLC13A4Q9UKG4 626 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 C19orf53Q9UNZ5 99 aaPredicted RBP4.09□□□□□ -1.75
GTF3A-207ENST00000482655 LAMP3Q9UQV4 416 aa4.09□□□□□ -1.75
GTF3A-207ENST00000482655 TMEM131LA2VDJ0 1609 aa4.09□□□□□ -1.76
GTF3A-207ENST00000482655 XRN1Q8IZH2 1706 aaKnown RBP4.09□□□□□ -1.76
GTF3A-207ENST00000482655 C3orf70A6NLC5 250 aaPredicted RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 NKX2-8O15522 239 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 SMAD6O43541 496 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 FAM155BO75949 473 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 CER1O95813 267 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 FGF2P09038 288 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 CHRNB1P11230 501 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 KLRK1P26718 216 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 POLD2P49005 469 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 MCM2P49736 904 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 PGGT1BP53609 377 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 DDX10Q13206 875 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 MAPRE1Q15691 268 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 AAK1Q2M2I8 961 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 NUGGCQ68CJ6 796 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 TMEM88Q6PEY1 159 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 MEPCEQ7L2J0 689 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 LRRTM4Q86VH4 590 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 SUGP1Q8IWZ8 645 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 TMEM57Q8N5G2 664 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 PPHLN1Q8NEY8 458 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 IL17REQ8NFR9 667 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 MSI2Q96DH6 328 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 REXO5Q96IC2 774 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 ZNF347Q96SE7 839 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 SEC62Q99442 399 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 DDX23Q9BUQ8 820 aaKnown RBP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 UNC45AQ9H3U1 944 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 SFXN1Q9H9B4 322 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.08□□□□□ -1.76
GTF3A-207ENST00000482655 CNTNAP2Q9UHC6 1331 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 GJD2Q9UKL4 321 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 BAG5Q9UL15 447 aa4.08□□□□□ -1.76
GTF3A-207ENST00000482655 NALCNQ8IZF0 1738 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 GCC2Q8IWJ2 1684 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 COL22A1Q8NFW1 1626 aaPredicted RBP4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TRPM2O94759 1503 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 LMTK2Q8IWU2 1503 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 EHBP1L1Q8N3D4 1523 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 NCOA3Q9Y6Q9 1424 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 PLEKHG1Q9ULL1 1385 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 CCDC196A0A1B0GTZ2 297 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 A6NNC1 897 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 H0Y3Z8 333 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 H0YGN5 161 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 M0QYT0 321 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 ATG13O75143 517 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 LARGE1O95461 756 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TK1P04183 234 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 RXRAP19793 462 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 CNTFP26441 200 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms