RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 HMGA1P17096 107 aaKnown RBP20.18■□□□□ 0.82
CHKB-209ENST00000481673 RPL17P18621 184 aaKnown RBP20.18■□□□□ 0.82
CHKB-209ENST00000481673 PAMP19021 973 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 ELF1P32519 619 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 CCDC15Q0P6D6 951 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 OLIG2Q13516 323 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 SERINC3Q13530 473 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 TEDDM1Q5T9Z0 273 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 ATG16L1Q676U5 607 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 FBXO46Q6PJ61 603 aaPredicted RBP20.18■□□□□ 0.82
CHKB-209ENST00000481673 KCNMB4Q86W47 210 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 UNC5BQ8IZJ1 945 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 IPMKQ8NFU5 416 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 RBBP8Q99708 897 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 DDX50Q9BQ39 737 aaKnown RBP20.18■□□□□ 0.82
CHKB-209ENST00000481673 SLC13A1Q9BZW2 595 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 MAGEH1Q9H213 219 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 CYP4F11Q9HBI6 524 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 CHRAC1Q9NRG0 131 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 SSX2IPQ9Y2D8 614 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 USH1CQ9Y6N9 552 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 C2CD2LO14523 706 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 POLD2P49005 469 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 UGP2Q16851 508 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 TMEM199Q8N511 208 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 ARMC5Q96C12 935 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 C20orf96Q9NUD7 363 aaPredicted RBP20.18■□□□□ 0.82
CHKB-209ENST00000481673 NUP205Q92621 2012 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 SEC24AO95486 1093 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 MT-CYBP00156 380 aaPredicted RBP20.17■□□□□ 0.82
CHKB-209ENST00000481673 LIMK2P53671 638 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 CDH4P55283 916 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 ACTN3Q08043 901 aaPredicted RBP20.17■□□□□ 0.82
CHKB-209ENST00000481673 DENND5AQ6IQ26 1287 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 CGB2Q6NT52 195 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 TCEAL8Q8IYN2 117 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 BBS5Q8N3I7 341 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 MFSD3Q96ES6 412 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 APOL2Q9BQE5 337 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 FICDQ9BVA6 458 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 RXFP1Q9HBX9 757 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 PCMTD2Q9NV79 361 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 YIPF1Q9Y548 306 aa20.17■□□□□ 0.82
CHKB-209ENST00000481673 KIAA0355O15063 1070 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 ALDOAP04075 364 aaKnown RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 ILF2Q12905 390 aaKnown RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 NADSYN1Q6IA69 706 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 CES3Q6UWW8 571 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 CDHR3Q6ZTQ4 885 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 STRA8Q7Z7C7 330 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 ZNF354CQ86Y25 554 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 DIS3LQ8TF46 1054 aaKnown RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 ZNF419Q96HQ0 510 aaPredicted RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 MRGPRX2Q96LB1 330 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 TSSK1BQ9BXA7 367 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 SLCO1B3Q9NPD5 702 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 WDR91A4D1P6 747 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 ANKRD65E5RJM6 399 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 J3KR12 359 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 PRAMEF11O60813 436 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 CLDN11O75508 207 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 DCTN3O75935 186 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 LATS1O95835 1130 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 MPOP05164 745 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 TPH1P17752 444 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 TYK2P29597 1187 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 SERPINB8P50452 374 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 KCNQ1P51787 676 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 EPHB3P54753 998 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 WNT3AP56704 352 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 PLD1Q13393 1074 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 LAMB3Q13751 1172 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 SETDB1Q15047 1291 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 PABPC1LQ4VXU2 614 aaKnown RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 HSP90AA5PQ58FG0 334 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 TMCO4Q5TGY1 634 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 KDELC1Q6UW63 502 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 OTOAQ7RTW8 1153 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 LCA5Q86VQ0 697 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 LGI2Q8N0V4 545 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 PSMG2Q969U7 264 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 PABPC5Q96DU9 382 aaKnown RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 RANBP9Q96S59 729 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 NT5MQ9NPB1 228 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 MRPL17Q9NRX2 175 aaKnown RBP20.16■□□□□ 0.82
CHKB-209ENST00000481673 SIRPGQ9P1W8 387 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 TCAF1Q9Y4C2 921 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 PSAT1Q9Y617 370 aa20.16■□□□□ 0.82
CHKB-209ENST00000481673 HEATR9A2RTY3 570 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 COCHO43405 550 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 PMPCBO75439 489 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 WDR5P61964 334 aaKnown RBP20.15■□□□□ 0.82
CHKB-209ENST00000481673 SLC10A7Q0GE19 358 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 NLRP9Q7RTR0 991 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 ITIH5Q86UX2 942 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 CNTN4Q8IWV2 1026 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 SPOCK2Q92563 424 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 TRIM55Q9BYV6 548 aa20.15■□□□□ 0.82
CHKB-209ENST00000481673 POLR1EQ9GZS1 481 aaKnown RBP20.15■□□□□ 0.82
CHKB-209ENST00000481673 ATP13A1Q9HD20 1204 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms