RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CDR2Q01850 454 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 CYP4F3Q08477 520 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 OVGP1Q12889 678 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 KRT31Q15323 416 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 RAB6CQ53S08 254 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 ARSIQ5FYB1 569 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 CT47A1Q5JQC4 288 aaPredicted RBP15.58■□□□□ 0.08
LIMS3-203ENST00000480744 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 RETSATQ6NUM9 610 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 IQCHQ86VS3 1027 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 TMIEQ8NEW7 156 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 KLHDC7BQ96G42 594 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 C11orf70Q9BRQ4 267 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 RAB6CQ9H0N0 254 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 FZD3Q9NPG1 666 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 NOCTQ9UK39 431 aaKnown RBP15.58■□□□□ 0.08
LIMS3-203ENST00000480744 CHD5Q8TDI0 1954 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 RNF103O00237 685 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 LEFTY1O75610 366 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 THEGLP0DJG4 465 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 JUPP14923 745 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 HNF1BP35680 557 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 RXRGP48443 463 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 GNA12Q03113 381 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 C15orf59Q2T9L4 293 aaPredicted RBP15.57■□□□□ 0.08
LIMS3-203ENST00000480744 RWDD4Q6NW29 188 aaKnown RBP15.57■□□□□ 0.08
LIMS3-203ENST00000480744 ZNF783Q6ZMS7 281 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 DPY19L3Q6ZPD9 716 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 ERN2Q76MJ5 926 aaKnown RBP15.57■□□□□ 0.08
LIMS3-203ENST00000480744 TMPRSS12Q86WS5 348 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 HORMAD1Q86X24 394 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 ZNF677Q86XU0 584 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 PDCD7Q8N8D1 485 aaKnown RBP15.57■□□□□ 0.08
LIMS3-203ENST00000480744 SLC30A5Q8TAD4 765 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 ENOX1Q8TC92 643 aaKnown RBP15.57■□□□□ 0.08
LIMS3-203ENST00000480744 RXFP2Q8WXD0 754 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 PPP1R16AQ96I34 528 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 PCMTD1Q96MG8 357 aaPredicted RBP15.57■□□□□ 0.08
LIMS3-203ENST00000480744 GPSM3Q9Y4H4 160 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 PCDHGA1Q9Y5H4 931 aa15.57■□□□□ 0.08
LIMS3-203ENST00000480744 URB1O60287 2271 aaKnown RBP15.56■□□□□ 0.08
LIMS3-203ENST00000480744 GJB6O95452 261 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 CYP1A1P04798 512 aaPredicted RBP15.56■□□□□ 0.08
LIMS3-203ENST00000480744 CHRNB2P17787 502 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 MMP8P22894 467 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 SDC4P31431 198 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 AKT2P31751 481 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 SOX5P35711 763 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 ACADVLP49748 655 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 SERPINH1P50454 418 aaKnown RBP15.56■□□□□ 0.08
LIMS3-203ENST00000480744 FMO1Q01740 532 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 CAMK2BQ13554 666 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 ARL13BQ3SXY8 428 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 SFMBT2Q5VUG0 894 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 CDKAL1Q5VV42 579 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 SEL1L3Q68CR1 1132 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 NEK5Q6P3R8 708 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 ARCQ7LC44 396 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 BNIPLQ7Z465 357 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 RYBPQ8N488 228 aaPredicted RBP15.56■□□□□ 0.08
LIMS3-203ENST00000480744 JOSD2Q8TAC2 188 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 GPT2Q8TD30 523 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 HNRNPLLQ8WVV9 542 aaKnown RBP15.56■□□□□ 0.08
LIMS3-203ENST00000480744 GBP4Q96PP9 640 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 CALN1Q9BXU9 219 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 ZNF212Q9UDV6 495 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 FCF1Q9Y324 198 aaKnown RBP15.56■□□□□ 0.08
LIMS3-203ENST00000480744 ACTL7AQ9Y615 435 aa15.56■□□□□ 0.08
LIMS3-203ENST00000480744 EPHB6O15197 1021 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ZMPSTE24O75844 475 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 C1SP09871 688 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 HOXB3P14651 431 aaPredicted RBP15.55■□□□□ 0.08
LIMS3-203ENST00000480744 HNRNPA2B1P22626 353 aaKnown RBP15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ADRA1BP35368 520 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ACVRL1P37023 503 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 STAT1P42224 750 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 CCNHP51946 323 aaPredicted RBP15.55■□□□□ 0.08
LIMS3-203ENST00000480744 NEK3P51956 506 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 CLDN2P57739 230 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ARF5P84085 180 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 SLC20A2Q08357 652 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
LIMS3-203ENST00000480744 COL28A1Q2UY09 1125 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ZNF284Q2VY69 593 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 CCDC14Q49A88 953 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 CARD16Q5EG05 197 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ARTNQ5T4W7 220 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 FBXL19Q6PCT2 694 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 KANSL1Q7Z3B3 1105 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 PCDH20Q8N6Y1 951 aaKnown RBP15.55■□□□□ 0.08
LIMS3-203ENST00000480744 TMEM145Q8NBT3 493 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 HEPHQ9BQS7 1158 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 HDAC8Q9BY41 377 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 TM6SF2Q9BZW4 377 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 CEP44Q9C0F1 390 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 ZDHHC6Q9H6R6 413 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 FANCLQ9NW38 375 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 PPARGC1AQ9UBK2 798 aaKnown RBP15.55■□□□□ 0.08
LIMS3-203ENST00000480744 OR12D3Q9UGF7 316 aa15.55■□□□□ 0.08
LIMS3-203ENST00000480744 DNAI1Q9UI46 699 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms