RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TRIM32Q13049 653 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 STARD7Q9NQZ5 370 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 VPS4AQ9UN37 437 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CCNDBP1O95273 360 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 RFTN2Q52LD8 501 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 FNIP1Q8TF40 1166 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CDHR5Q9HBB8 845 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CKLFQ9UBR5 152 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 RAB25P57735 213 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SWT1Q5T5J6 900 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ARMC8Q8IUR7 673 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SUSD6Q92537 303 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TBCDQ9BTW9 1192 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 HGH1Q9BTY7 390 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CD248Q9HCU0 757 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ING4Q9UNL4 249 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 KLRC2P26717 231 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CCT3P49368 545 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 IL27RAQ6UWB1 636 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF276Q8N554 614 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ACMSDQ8TDX5 336 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ATP13A3Q9H7F0 1226 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 LOXHD1Q8IVV2 1947 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 H3BRB1 525 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 APOC4-APOC2K7ER74 178 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 APOC2P02655 101 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CAP2P40123 477 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MKRN4PQ13434 485 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 LSM12Q3MHD2 195 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PTAR1Q7Z6K3 402 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MCOLN2Q8IZK6 566 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MSL3Q8N5Y2 521 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 EEF1AKMT1Q8WVE0 214 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 NELL1Q92832 810 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 REXO5Q96IC2 774 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PRKAR1AP10644 381 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ELK3P41970 407 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 UGT2B15P54855 530 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 BNC1Q01954 994 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 OTUD3Q5T2D3 398 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SSNA1O43805 119 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SLC25A12O75746 678 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 FAUP35544 74 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CCDC36Q8IYA8 594 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PHF10Q8WUB8 498 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CRELD1Q96HD1 420 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 POPDC2Q9HBU9 364 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 UNC13CQ8NB66 2214 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 AP1S2P56377 157 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PPM1LQ5SGD2 360 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 STK32CQ86UX6 486 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 OR7A2PQ8NGA2 310 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 S100ZQ8WXG8 99 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 RNF145Q96MT1 663 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 OMDQ99983 421 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PCDHGB3Q9Y5G1 929 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 LOC100506127A0A0U1RQW1 187 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ANKDD1BA6NHY2 528 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 GCATO75600 419 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ROR2Q01974 943 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MTAPQ13126 283 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 GJB7Q6PEY0 223 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SMYD1Q8NB12 490 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 STAG3L4Q8TBR4 150 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CCNB1IP1Q9NPC3 277 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MARCH2Q9P0N8 246 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 LMTK2Q8IWU2 1503 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CDK5RAP2Q96SN8 1893 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SLC37A4O43826 429 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CSH1P0DML2 217 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 CSH2P0DML3 217 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 UGT1A5P35504 534 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SNRPD1P62314 119 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 SMCO1Q147U7 214 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 FBXL19Q6PCT2 694 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ZPBP2Q6X784 338 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 PHF11Q9UIL8 331 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 NDUFS2O75306 463 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ARCQ7LC44 396 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TRAPPC5Q8IUR0 188 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TDRKHQ9Y2W6 561 aaKnown RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 LYVE1Q9Y5Y7 322 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 GMEB1Q9Y692 573 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MICAL2O94851 1124 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 VTNP04004 478 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TCF4P15884 667 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 MYL9P24844 172 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF846Q147U1 533 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 TCP10LQ8TDR4 215 aa9.66□□□□□ -0.86
VEGFA-212ENST00000480614 ACSF2Q96CM8 615 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-212ENST00000480614 BTN3A1O00481 513 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 KHDRBS3O75525 346 aaKnown RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 FTH1P02794 183 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ANXA5P08758 320 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 PCSK2P16519 638 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms