RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
TRA2B-212ENST00000480461 ATG2BQ96BY7 2078 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 MIF4GDA9UHW6 222 aaKnown RBP12.49□□□□□ -0.41
TRA2B-212ENST00000480461 CBX4O00257 560 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 ENC1O14682 589 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 MFSD11O43934 449 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 CST8O60676 142 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 PEX11BO96011 259 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 ATP5BP06576 529 aaKnown RBP12.49□□□□□ -0.41
TRA2B-212ENST00000480461 LRRC32Q14392 662 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 EIF4HQ15056 248 aaKnown RBP12.49□□□□□ -0.41
TRA2B-212ENST00000480461 RPS6KA1Q15418 735 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 PARP15Q460N3 678 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 TFDP3Q5H9I0 405 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 KAZNQ674X7 775 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 KIAA1211LQ6NV74 962 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 DCAF4L2Q8NA75 395 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 FRS2Q8WU20 508 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 WDR24Q96S15 920 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 GABRG3Q99928 467 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 IER2Q9BTL4 223 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 PDFQ9HBH1 243 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 ATP13A1Q9HD20 1204 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 DTLQ9NZJ0 730 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRA2B-212ENST00000480461 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
TRA2B-212ENST00000480461 RNF103O00237 685 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 DFFAO00273 331 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 MAFKO60675 156 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 ATP1A1P05023 1023 aaKnown RBP12.48□□□□□ -0.41
TRA2B-212ENST00000480461 SRCP12931 536 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-212ENST00000480461 NTSR1P30989 418 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 CXCR5P32302 372 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-212ENST00000480461 CCR3P51677 355 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 COPS2P61201 443 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 DYNLT1P63172 113 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 SATB1Q01826 763 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 SIM2Q14190 667 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-212ENST00000480461 CYTH1Q15438 398 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 RFX6Q8HWS3 928 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 LZTR1Q8N653 840 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 UBL4BQ8N7F7 174 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 ACDQ96AP0 544 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 ZNF419Q96HQ0 510 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-212ENST00000480461 OSBPL8Q9BZF1 889 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 PLA2G4CQ9UP65 541 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
TRA2B-212ENST00000480461 NUP205Q92621 2012 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 WDFY3Q8IZQ1 3526 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 K7ESF4 209 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 APOL1O14791 398 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 HRO43593 1189 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 ATP9BO43861 1147 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 FOXD2O60548 495 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 PRAMEF11O60813 436 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 ASLP04424 464 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 PROS1P07225 676 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 SRPRAP08240 638 aaKnown RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 PTPN7P35236 360 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 GALNT2Q10471 571 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 SRSF5Q13243 272 aaKnown RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 DLG2Q15700 870 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 CRY1Q16526 586 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 PPP2R5EQ16537 467 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 BBS12Q6ZW61 710 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 SH2D3CQ8N5H7 860 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 UCMAQ8WVF2 138 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 PTPRN2Q92932 1015 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 RBM41Q96IZ5 413 aaKnown RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 C2orf49Q9BVC5 232 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 MAK16Q9BXY0 300 aaKnown RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 PRSS16Q9NQE7 514 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 IPO11Q9UI26 975 aaKnown RBP12.47□□□□□ -0.41
TRA2B-212ENST00000480461 EFR3BQ9Y2G0 817 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 JRKLQ9Y4A0 524 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 HEY1Q9Y5J3 304 aa12.47□□□□□ -0.41
TRA2B-212ENST00000480461 IGF2RP11717 2491 aa12.46□□□□□ -0.41
TRA2B-212ENST00000480461 ARHGAP42A6NI28 874 aa12.46□□□□□ -0.41
TRA2B-212ENST00000480461 KCNK3O14649 394 aa12.46□□□□□ -0.41
TRA2B-212ENST00000480461 TM4SF5O14894 197 aa12.46□□□□□ -0.41
TRA2B-212ENST00000480461 MUSKO15146 869 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms