RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MSI1O43347 362 aaKnown RBP12.2□□□□□ -0.46
USP11-208ENST00000480104 KIF20AO95235 890 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 TNNI1P19237 187 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 TCN2P20062 427 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 RPS24P62847 133 aaKnown RBP12.2□□□□□ -0.46
USP11-208ENST00000480104 MC1RQ01726 317 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 CEP135Q66GS9 1140 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 GDF7Q7Z4P5 450 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 APCDD1Q8J025 514 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 CRYBG2Q8N1P7 616 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 ARHGAP18Q8N392 663 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 RCBTB1Q8NDN9 531 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 ART4Q93070 314 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
USP11-208ENST00000480104 TBATAQ96M53 351 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 RRN3Q9NYV6 651 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 ACANP16112 2415 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 IRAK2O43187 625 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 GCNT3O95395 438 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 MOCS3O95396 460 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 ATICP31939 592 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 NR6A1Q15406 480 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 ZNF699Q32M78 642 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 MAP9Q49MG5 647 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 ZRANB3Q5FWF4 1079 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 SKAP1Q86WV1 359 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 RAD54LQ92698 747 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 SLC13A1Q9BZW2 595 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 LUZP4Q9P127 313 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 PILRAQ9UKJ1 303 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 GPR34Q9UPC5 381 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 DOLKQ9UPQ8 538 aa12.19□□□□□ -0.46
USP11-208ENST00000480104 OAS3Q9Y6K5 1087 aaKnown RBP12.19□□□□□ -0.46
USP11-208ENST00000480104 HEATR9A2RTY3 570 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 PAK4O96013 591 aaPredicted RBP12.18□□□□□ -0.46
USP11-208ENST00000480104 ZNF18P17022 549 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 NNMTP40261 264 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 CRTC2Q53ET0 693 aaPredicted RBP12.18□□□□□ -0.46
USP11-208ENST00000480104 ZNF667Q5HYK9 610 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 Q6ZVU0 165 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 CCDC127Q96BQ5 260 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 C8orf76Q96K31 380 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 EFHD1Q9BUP0 239 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 DDA1Q9BW61 102 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 SLC17A9Q9BYT1 436 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 VRTNQ9H8Y1 702 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 RDH14Q9HBH5 336 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP11-208ENST00000480104 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
USP11-208ENST00000480104 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
USP11-208ENST00000480104 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 KPNA3O00505 521 aaPredicted RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 FPGTO14772 594 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 MCF2LO15068 1137 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 ALOX15BO15296 676 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 STX6O43752 255 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 NADKO95544 446 aaPredicted RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 CTSLP07711 333 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 DRD2P14416 443 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 PMS2P54278 862 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 PFN3P60673 137 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 ME3Q16798 604 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 FAXCQ5TGI0 409 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 NADSYN1Q6IA69 706 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 NLGN4XQ8N0W4 816 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 NLGN4YQ8NFZ3 816 aaPredicted RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 OR6C4Q8NGE1 309 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 NDRG1Q92597 394 aaKnown RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 CYFIP2Q96F07 1278 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 TWNKQ96RR1 684 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 KLF6Q99612 283 aaPredicted RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
USP11-208ENST00000480104 CSPG4Q6UVK1 2322 aa12.17□□□□□ -0.46
USP11-208ENST00000480104 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 KIAA0391O15091 583 aaKnown RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 BNIP3LO60238 219 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 DNAJB5O75953 348 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 LUC7L3O95232 432 aaKnown RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 PDCP20941 246 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 SLC11A2P49281 568 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 CERCAMQ5T4B2 595 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 BHLHA9Q7RTU4 235 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 CCDC117Q8IWD4 279 aaPredicted RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 FSTL5Q8N475 847 aaPredicted RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 Q8NA96 180 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 EDEM1Q92611 657 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 OLA1Q9NTK5 396 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms