RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 VRTNQ9H8Y1 702 aa13.36□□□□□ -0.27
CNKSR3-204ENST00000479339 MAGEE1Q9HCI5 957 aa13.36□□□□□ -0.27
CNKSR3-204ENST00000479339 XPO7Q9UIA9 1087 aaKnown RBP13.36□□□□□ -0.27
CNKSR3-204ENST00000479339 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
CNKSR3-204ENST00000479339 RBMX2Q9Y388 322 aaKnown RBP13.36□□□□□ -0.27
CNKSR3-204ENST00000479339 M0QX08 132 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 FOXD2O60548 495 aaPredicted RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 GMNNO75496 209 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TOM1L1O75674 476 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TPPPO94811 219 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 BCL10O95999 233 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 XRCC1P18887 633 aaPredicted RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SERPINB9P50453 376 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 NUDT2P50583 147 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 RFTN1Q14699 578 aaPredicted RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 FAXCQ5TGI0 409 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TTC33Q6PID6 262 aaPredicted RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 PHOSPHO2Q8TCD6 241 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 MYLIPQ8WY64 445 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TMEM121Q9BTD3 319 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SMARCAD1Q9H4L7 1026 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 COQ10BQ9H8M1 238 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 DDX56Q9NY93 547 aaKnown RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 HACD3Q9P035 362 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 CORINQ9Y5Q5 1042 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 hCG_1818297A0A087WSY0 165 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 HTRA2O43464 458 aaPredicted RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 PIAS1O75925 651 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 KRT34O76011 436 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 ERBB2P04626 1255 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 ELK3P41970 407 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 NUMBP49757 651 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 CDH15P55291 814 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TUBA1BP68363 451 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 GRIN2CQ14957 1233 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 RAB39AQ14964 217 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TFDP3Q5H9I0 405 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 GPR107Q5VW38 600 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SLX4IPQ5VYV7 408 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 GALNT18Q6P9A2 607 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TRIM72Q6ZMU5 477 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 AGMOQ6ZNB7 445 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TUBA1AQ71U36 451 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 MON1BQ7L1V2 547 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 NIPA1Q7RTP0 329 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 PNPT1Q8TCS8 783 aaKnown RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 CNDP1Q96KN2 507 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 NT5C1BQ96P26 610 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 IKZF4Q9H2S9 585 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TMEM206Q9H813 350 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SIAEQ9HAT2 523 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 HMG20AQ9NP66 347 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 YBX2Q9Y2T7 364 aaKnown RBP13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 TEX264Q9Y6I9 313 aa13.35□□□□□ -0.27
CNKSR3-204ENST00000479339 SCN5AQ14524 2016 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 CLDN25C9JDP6 229 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 CYB561D2O14569 222 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 KLHL41O60662 606 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 NBNO60934 754 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 RNASEH2AO75792 299 aaKnown RBP13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 TMEM63AO94886 807 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 KRT10P13645 584 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 CD247P20963 164 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 MYF6P23409 242 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 PRKCHP24723 683 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 CNTFP26441 200 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 MAP4P27816 1152 aaKnown RBP13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 ADSLP30566 484 aaPredicted RBP13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 GJC1P36383 396 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 SNRPFP62306 86 aaKnown RBP13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 ADAM17P78536 824 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 SP4Q02446 784 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 PTK2BQ14289 1009 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 NRF1Q16656 503 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 CNKSR3Q6P9H4 555 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 TIFABQ6ZNK6 161 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 HEATR4Q86WZ0 1026 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 DSELQ8IZU8 1212 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 FAM47BQ8NA70 645 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 DUS3LQ96G46 650 aaKnown RBP13.34□□□□□ -0.27
CNKSR3-204ENST00000479339 UHRF1Q96T88 793 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms