RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 VDRP11473 427 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 ELK4P28324 431 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 PRELPP51888 382 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 PLA2G16P53816 162 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 P2RX3P56373 397 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 SLC25A11Q02978 314 aaKnown RBP21.54■■□□□ 1.04
SDF4-206ENST00000478938 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
SDF4-206ENST00000478938 C6orf10Q5SRN2 563 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 CYP4A22Q5TCH4 519 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 LRRC8EQ6NSJ5 796 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 ZNF773Q6PK81 442 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 GADL1Q6ZQY3 521 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 PIGZQ86VD9 579 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 COLGALT2Q8IYK4 626 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 ARFGAP1Q8N6T3 406 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 SGCDQ92629 289 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 RMDN3Q96TC7 470 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.54■■□□□ 1.041e-6■■■□□ 15.7
SDF4-206ENST00000478938 AURKCQ9UQB9 309 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 UGT2A1Q9Y4X1 527 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 FER1L6Q2WGJ9 1857 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 HEATR9A2RTY3 570 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 DLG2Q15700 870 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 CRTC3Q6UUV7 619 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 KCTD17Q8N5Z5 321 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 ANGPTL3Q9Y5C1 460 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 PSAT1Q9Y617 370 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 COPG1Q9Y678 874 aaKnown RBP21.53■■□□□ 1.04
SDF4-206ENST00000478938 H7C0C1 242 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 DYRK3O43781 588 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 XYLBO75191 536 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 ACO1P21399 889 aaKnown RBP21.53■■□□□ 1.04
SDF4-206ENST00000478938 NAMPTP43490 491 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 ATP5OP48047 213 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 PIGHQ14442 188 aaPredicted RBP21.53■■□□□ 1.04
SDF4-206ENST00000478938 TRMT1LQ7Z2T5 733 aaKnown RBP21.53■■□□□ 1.04
SDF4-206ENST00000478938 ACMSDQ8TDX5 336 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 FIG4Q92562 907 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 NGLY1Q96IV0 654 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 KIFC3Q9BVG8 833 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 CALN1Q9BXU9 219 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 AASDHPPTQ9NRN7 309 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 PCSK1NQ9UHG2 260 aa21.53■■□□□ 1.04
SDF4-206ENST00000478938 AXIN1O15169 862 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 GAS7O60861 476 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 CASP3P42574 277 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 HERC3Q15034 1050 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 PAGE2BQ5JRK9 111 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 RSBN1Q5VWQ0 802 aaPredicted RBP21.52■■□□□ 1.04
SDF4-206ENST00000478938 TMEM174Q8WUU8 243 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 PKD2L2Q9NZM6 624 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 TCRBV5S1A1TA0A578 114 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 TRIM24O15164 1050 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 TMCC2O75069 709 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 RFPL2O75678 378 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 DDX5P17844 614 aaKnown RBP21.52■■□□□ 1.04
SDF4-206ENST00000478938 GNG2P59768 71 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 UBXN2AP68543 259 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 MMRN1Q13201 1228 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 INTS11Q5TA45 600 aaKnown RBP21.52■■□□□ 1.04
SDF4-206ENST00000478938 SEL1L3Q68CR1 1132 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 CMC1Q7Z7K0 106 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 PACRGLQ8N7B6 248 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 FUNDC2Q9BWH2 189 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 OAZ3Q9UMX2 235 aa21.52■■□□□ 1.04
SDF4-206ENST00000478938 MAP3K6O95382 1288 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 HDCP19113 662 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 GARTP22102 1010 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 PSMA2P25787 234 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 CCND2P30279 289 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 SMU1Q2TAY7 513 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 PITRM1Q5JRX3 1037 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 SLC16A12Q6ZSM3 486 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 BEND7Q8N7W2 519 aaPredicted RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 CNTD1Q8N815 330 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 ASCC1Q8N9N2 400 aaKnown RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 SLC4A11Q8NBS3 891 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 KCTD6Q8NC69 237 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 S100ZQ8WXG8 99 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 SLC7A3Q8WY07 619 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 TOP1MTQ969P6 601 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 HDAC11Q96DB2 347 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 SIGLEC10Q96LC7 697 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 YME1L1Q96TA2 773 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 EBNA1BP2Q99848 306 aaKnown RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 EI24O14681 340 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 HDAC3O15379 428 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 KCNN4O15554 427 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 LRCH4O75427 683 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 KCNK2O95069 426 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 NADKO95544 446 aaPredicted RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 ATP6V1B2P21281 511 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 GRIA1P42261 906 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 CYP24A1Q07973 514 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 FSTL1Q12841 308 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 POLD3Q15054 466 aaPredicted RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 CRY1Q16526 586 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 WDR78Q5VTH9 848 aa21.51■■□□□ 1.03
SDF4-206ENST00000478938 PLD6Q8N2A8 252 aaKnown RBP21.51■■□□□ 1.03
SDF4-206ENST00000478938 OSCP1Q8WVF1 389 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms