RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GFPT2O94808 682 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 UCHL3P15374 230 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 CDH5P33151 784 aaPredicted RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 ACVRL1P37023 503 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 RXRGP48443 463 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 SNX16P57768 344 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 BPIFB4P59827 614 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 C15orf59Q2T9L4 293 aaPredicted RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 SETMARQ53H47 684 aaPredicted RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 FBXL19Q6PCT2 694 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 LRRC31Q6UY01 552 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 ZDHHC17Q8IUH5 632 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 FAM114A1Q8IWE2 563 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 DCAF4L2Q8NA75 395 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 SLC30A5Q8TAD4 765 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 PPP1R9BQ96SB3 815 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 VPS16Q9H269 839 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 KDM4CQ9H3R0 1056 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 ERVMER34-1Q9H9K5 563 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 NDFIP2Q9NV92 336 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 ZNF212Q9UDV6 495 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 IL36AQ9UHA7 158 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 TMEM59LQ9UK28 342 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 DMTF1Q9Y222 760 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 KNTC1P50748 2209 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 BPTFQ12830 3046 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 F8VZ95 297 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 FAM72CH0Y354 149 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 EPHB6O15197 1021 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 RAD51BO15315 384 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 YKT6O15498 198 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 TLX3O43711 291 aaPredicted RBP11.91□□□□□ -0.5
VARS2-208ENST00000477052 ZMPSTE24O75844 475 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 F9P00740 461 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 CKMT2P17540 419 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 CHRNB2P17787 502 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 DGKAP23743 735 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 NOMO3P69849 1222 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 ARF5P84085 180 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 FGL2Q14314 439 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 TCP11X2Q5H9J9 407 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 FAM72AQ5TYM5 149 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 FAM72DQ6L9T8 149 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 GCNT7Q6ZNI0 430 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 ERN2Q76MJ5 926 aaKnown RBP11.91□□□□□ -0.5
VARS2-208ENST00000477052 SETD3Q86TU7 594 aaPredicted RBP11.91□□□□□ -0.5
VARS2-208ENST00000477052 IQCHQ86VS3 1027 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 HORMAD1Q86X24 394 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 FAM72BQ86X60 149 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 SLC22A18ASQ8N1D0 253 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 TMEM145Q8NBT3 493 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 TMIEQ8NEW7 156 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 JOSD2Q8TAC2 188 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 EPS8L1Q8TE68 723 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 PGAP3Q96FM1 320 aaPredicted RBP11.91□□□□□ -0.5
VARS2-208ENST00000477052 TM6SF2Q9BZW4 377 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 GANQ9H2C0 597 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 ATP13A1Q9HD20 1204 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 NLRC4Q9NPP4 1024 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 DYRK4Q9NR20 520 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 RRN3Q9NYV6 651 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 DKK4Q9UBT3 224 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 GGT7Q9UJ14 662 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 ITM2BQ9Y287 266 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 PCDHGA1Q9Y5H4 931 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 WASF2Q9Y6W5 498 aa11.91□□□□□ -0.5
VARS2-208ENST00000477052 NEBLO76041 1014 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 CD160O95971 181 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 PAK4O96013 591 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 PRNPP04156 253 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 HNF1BP35680 557 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 EIF2S3P41091 472 aaKnown RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 RECQLP46063 649 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 CCNHP51946 323 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 INSM1Q01101 510 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 GNA12Q03113 381 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 LRRC73Q5JTD7 316 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 C6orf118Q5T5N4 469 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 RWDD4Q6NW29 188 aaKnown RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 Q6ZSR6 202 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 PARS2Q7L3T8 475 aaKnown RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 BNIPLQ7Z465 357 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 PTAR1Q7Z6K3 402 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 RYBPQ8N488 228 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 OXR1Q8N573 874 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 RXFP2Q8WXD0 754 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 C1orf74Q96LT6 269 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 C11orf70Q9BRQ4 267 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 ZYG11BQ9C0D3 744 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms