RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TTC27Q6P3X3 843 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 SHC4Q6S5L8 630 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 PLEKHG7Q6ZR37 379 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 BNIPLQ7Z465 357 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 DNAAF5Q86Y56 855 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 C7orf61Q8IZ16 206 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 ADGRF2Q8IZF7 708 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 POU5F2Q8N7G0 328 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 ZBTB38Q8NAP3 1195 aaPredicted RBP4.21□□□□□ -1.73
CD55-208ENST00000476590 PIK3C3Q8NEB9 887 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 HM13Q8TCT9 377 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 MCOLN3Q8TDD5 553 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.21□□□□□ -1.73
CD55-208ENST00000476590 DENND1AQ8TEH3 1009 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 TMIGD2Q96BF3 282 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 TESCQ96BS2 214 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 DCUN1D1Q96GG9 259 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 AHCYL2Q96HN2 611 aaKnown RBP4.21□□□□□ -1.73
CD55-208ENST00000476590 TEKT5Q96M29 485 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 GCNAQ96QF7 691 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 CNPY3Q9BT09 278 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 METTL22Q9BUU2 404 aaPredicted RBP4.21□□□□□ -1.73
CD55-208ENST00000476590 CHID1Q9BWS9 393 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 CDADC1Q9BWV3 514 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 TEX13BQ9BXU2 312 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 BCL2L14Q9BZR8 327 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 SLC6A15Q9H2J7 730 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 RPF2Q9H7B2 306 aaKnown RBP4.21□□□□□ -1.73
CD55-208ENST00000476590 HMG20AQ9NP66 347 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 KCNK9Q9NPC2 374 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 PRDM8Q9NQV8 689 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 IARS2Q9NSE4 1012 aaKnown RBP4.21□□□□□ -1.73
CD55-208ENST00000476590 ARL8BQ9NVJ2 186 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 UBP1Q9NZI7 540 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 TMEM9Q9P0T7 183 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 SLC24A2Q9UI40 661 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 ZNF221Q9UK13 617 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 KCNH3Q9ULD8 1083 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 POLIQ9UNA4 740 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 MED16Q9Y2X0 877 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 AP4B1Q9Y6B7 739 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 SNCAIPQ9Y6H5 919 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 KCNE2Q9Y6J6 123 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 ZNF532Q9HCE3 1301 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 SALL1Q9NSC2 1324 aa4.21□□□□□ -1.73
CD55-208ENST00000476590 ZNFX1Q9P2E3 1918 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 A0A1B0GTQ1 180 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 FAM83GA6ND36 823 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CENPXA8MT69 81 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 LINC00587B1AMM8 73 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 MEN1O00255 615 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 PLOD2O00469 737 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 PODXLO00592 558 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 EIF1AYO14602 144 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 ATP2A1O14983 1001 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 GMDSO60547 372 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 EDF1O60869 148 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 NOL3O60936 208 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 USP12O75317 370 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 LRRN2O75325 713 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 RFPL1O75677 317 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SURF6O75683 361 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 CCNKO75909 580 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 MFN2O95140 757 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ATE1O95260 518 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 PDGFAP04085 211 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 NTRK1P04629 796 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 IL6P05231 212 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 URODP06132 367 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ASNSP08243 561 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TMEM11P17152 192 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 NCF2P19878 526 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 PSMA2P25787 234 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TRHRP34981 398 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 IDUAP35475 653 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 STAT1P42224 750 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CCR10P46092 362 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 CAPZA2P47755 286 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ERFP50548 548 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 HIRAP54198 1017 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 NRLP54845 237 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 RNF4P78317 190 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 MRPS5P82675 430 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 CYP27A1Q02318 531 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 GCNT1Q02742 428 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 GNA12Q03113 381 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 DBPQ10586 325 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 BNIP3Q12983 259 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 SLC29A2Q14542 456 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 HERC3Q15034 1050 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TRIP13Q15645 432 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 KIZQ2M2Z5 673 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 ABCB5Q2M3G0 1257 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 WSCD2Q2TBF2 565 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 TWISTNBQ3B726 338 aaPredicted RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 ZACNQ401N2 412 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 PIK3R6Q5UE93 754 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 FAM91A1Q658Y4 838 aa4.21□□□□□ -1.74
CD55-208ENST00000476590 HEATR6Q6AI08 1181 aaKnown RBP4.21□□□□□ -1.74
CD55-208ENST00000476590 PM20D1Q6GTS8 502 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms